C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytochrome c oxidase assembly homolog 11 (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166260 COX11 9606 - 17:54951902-54968785 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000299335 COX11-001 54961206-54968785 protein_coding
  ENST00000571584 COX11-002 54962903-54968703 protein_coding
  ENST00000572088 COX11-004 54951906-54955149 retained_intron
  ENST00000572558 COX11-005 54951909-54968654 nonsense_mediated_decay
  ENST00000573912 COX11-007 54951906-54961265 processed_transcript
  ENST00000574821 COX11-006 54951935-54963414 nonsense_mediated_decay
  ENST00000574989 COX11-008 54959201-54961139 processed_transcript
  ENST00000576084 COX11-009 54951906-54954105 retained_intron
  ENST00000576370 COX11-003 54951902-54968653 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000299335ENST00000571584ENST00000572088ENST00000572558ENST00000576370
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000299335 7.509±0.00 9.593±0.00 8.243±0.00 9.875±4.22 5.171±1.39 9.657±0.90 6.120±2.46 13.122±4.17 8.027±2.60 5.855±0.60 5.640±2.26 7.644±1.46 5.322±1.80 8.287±0.78
ENST00000571584 N/A N/A N/A N/A N/A N/A 3.719±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000572088 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.194±0.00 N/A N/A
ENST00000572558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.293±0.00 N/A 5.618±0.00 20.254±0.00
ENST00000576370 N/A N/A N/A 4.567±0.00 N/A N/A N/A N/A N/A N/A N/A 5.254±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004X1 CIL_0004X1_0002 CGP 17:54951902-55173632

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004129 TAS cytochrome-c oxidase activity
GO:0005507 IEA copper ion binding
GO:0005515 IEA protein binding
GO:0005739 TAS mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0007585 TAS respiratory gaseous exchange
GO:0008535 TAS respiratory chain complex IV assembly
GO:0009055 TAS electron carrier activity
GO:0016021 IEA integral component of membrane
GO:0033132 IEA negative regulation of glucokinase activity
GO:1902600 TAS hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061004 cox11 COX11 cytochrome c oxidase assembly homolog (yeast) protein_coding Danio_rerio
ENSMUSG00000020544 Cox11 cytochrome c oxidase assembly protein 11 protein_coding Mus_musculus

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