C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cytochrome c oxidase assembly homolog 11 (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000572558 COX11-005 ENSG00000166260 9606 - 17:54951909-54968654 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; MusclePlacentaTestisENST00000572558
Transcript ID Muscle Placenta Testis
ENST00000572558 8.293±0.00 5.618±0.00 20.254±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004X1 CIL_0004X1_0002 CGP 17:54951902-55173632

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004129 TAS cytochrome-c oxidase activity
GO:0005507 IEA copper ion binding
GO:0005739 TAS mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0007585 TAS respiratory gaseous exchange
GO:0008535 TAS respiratory chain complex IV assembly
GO:0009055 TAS electron carrier activity
GO:0016021 IEA integral component of membrane
GO:1902600 TAS hydrogen ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020851 Cox11-001 protein_coding Mus_musculus 0 544
ENSMUST00000099960 Cox11-002 protein_coding Mus_musculus 0 340
ENSMUST00000020849 Tom1l1-001 protein_coding Mus_musculus 5.60519e-45 185

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