C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: synaptopodin 2-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166317 SYNPO2L 9606 - 10:73644881-73663803 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372873 SYNPO2L-001 73644881-73651029 protein_coding
  ENST00000394810 SYNPO2L-003 73644881-73656072 protein_coding
  ENST00000606523 SYNPO2L-004 73653359-73663803 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000372873ENST00000394810
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000372873 0.123±0.00 0.679±0.00 N/A 2.540±0.00 0.080±0.00 35.722±34.07 0.145±0.00 1.201±0.00 25.892±0.00 0.331±0.00 0.888±0.01 N/A
ENST00000394810 N/A N/A 0.253±0.00 2.995±0.00 N/A 21.252±16.08 N/A N/A 33.912±18.63 0.221±0.00 N/A 1.352±0.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000289 CIL_000289_0002 CGP 10:73631654-73663803

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005856 IEA cytoskeleton
GO:0030018 IEA Z disc

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077293 SYNPO2L (1 of 2) synaptopodin 2-like protein_coding Danio_rerio
ENSDARG00000078696 synpo2lb synaptopodin 2-like b protein_coding Danio_rerio
ENSMUSG00000039376 Synpo2l synaptopodin 2-like protein_coding Mus_musculus

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