C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptopodin 2-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394810 SYNPO2L-003 ENSG00000166317 9606 - 10:73644881-73656072 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartMuscleOvaryTestisENST00000394810
Transcript ID Brain Breast Heart Muscle Ovary Testis
ENST00000394810 0.253±0.00 2.995±0.00 21.252±16.08 33.912±18.63 0.221±0.00 1.352±0.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000289 CIL_000289_0002 CGP 10:73631654-73663803

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005856 IEA cytoskeleton
GO:0030018 IEA Z disc

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117386 Synpo2l-002 protein_coding Mus_musculus 0 3092
ENSMUST00000057090 Synpo2l-001 protein_coding Mus_musculus 0 3007
ENSMUST00000119483 Synpo2l-003 protein_coding Mus_musculus 0 2047

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