C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptopodin 2-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372873 SYNPO2L-001 ENSG00000166317 9606 - 10:73644881-73651029 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLiverLungMuscleOvaryPlacentaENST00000372873
Transcript ID Adipose Adrenal Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENST00000372873 0.123±0.00 0.679±0.00 2.540±0.00 0.080±0.00 35.722±34.07 0.145±0.00 1.201±0.00 25.892±0.00 0.331±0.00 0.888±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000289 CIL_000289_0002 CGP 10:73631654-73663803

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005856 IEA cytoskeleton

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119483 Synpo2l-003 protein_coding Mus_musculus 0 2148
ENSMUST00000117386 Synpo2l-002 protein_coding Mus_musculus 0 2047
ENSMUST00000057090 Synpo2l-001 protein_coding Mus_musculus 0 2047

Loading