C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, matrin-type 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000540921 ZMAT1-201 ENSG00000166432 9606 - X:101882288-101918633 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000540921
Transcript ID Adipose Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000540921 0.259±0.00 1.353±0.00 1.062±0.00 0.632±0.00 1.367±0.00 0.205±0.00 0.986±0.00 0.263±0.00 0.903±0.82 0.037±0.00 1.038±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00037S CIL_00037S_0001 CGP X:101832112-101932031

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0008270 IEA zinc ion binding
GO:0016884 IEA carbon-nitrogen ligase activity, with glutamine as amido-N-donor

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000064659 Zmat1-201 protein_coding Mus_musculus 0 904
ENSMUST00000113185 Zmat1-001 protein_coding Mus_musculus 0 904
ENSMUST00000141849 Zmat1-003 retained_intron Mus_musculus 0 800
ENSMUST00000151252 Zmat1-002 processed_transcript Mus_musculus 0 688

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