C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif containing 66
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166436 TRIM66 9606 - 11:8612037-8671866 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000299550 TRIM66-201 8612037-8658836 protein_coding
  ENST00000402157 TRIM66-001 8612037-8671866 protein_coding
  ENST00000481014 TRIM66-002 8615539-8658836 retained_intron
  ENST00000525788 TRIM66-007 8617764-8621043 retained_intron
  ENST00000529057 TRIM66-004 8645722-8648066 processed_transcript
  ENST00000529211 TRIM66-006 8617569-8619284 retained_intron
  ENST00000530502 TRIM66-005 8618877-8622845 protein_coding
  ENST00000531498 TRIM66-003 8644330-8671866 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000299550ENST00000402157ENST00000481014ENST00000525788ENST00000529211ENST00000530502
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000299550 0.481±0.00 0.242±0.00 0.435±0.00 N/A N/A 0.426±0.00 N/A N/A N/A 0.182±0.00 2.356±0.00
ENST00000402157 N/A 0.425±0.00 N/A 0.055±0.00 0.046±0.00 N/A N/A N/A 0.266±0.00 N/A 2.030±1.42
ENST00000481014 N/A N/A 0.369±0.00 N/A 0.093±0.00 0.250±0.00 N/A 0.069±0.02 0.502±0.00 N/A 2.018±0.00
ENST00000525788 N/A N/A N/A N/A N/A 2.364±0.00 N/A 0.431±0.00 N/A N/A N/A
ENST00000529211 N/A 0.959±0.00 N/A N/A N/A N/A 0.775±0.00 N/A N/A N/A N/A
ENST00000530502 N/A N/A N/A N/A 0.260±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00049G CIL_00049G_0001 CGP 11:8391868-8671866
CIL_0008Q2 CIL_0008Q2_0001 VISTA 11:8432154-9033661
CIL_00049H CIL_00049H_0001 CGP 11:8612037-8714759

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003682 IEA chromatin binding
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0008270 IEA zinc ion binding
GO:0010369 IEA chromocenter
GO:0016235 IDA aggresome
GO:0042803 IEA protein homodimerization activity
GO:0045892 IEA negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054332 trim66 tripartite motif containing 66 protein_coding Danio_rerio
ENSMUSG00000031026 Trim66 tripartite motif-containing 66 protein_coding Mus_musculus

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