C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 66
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000402157 TRIM66-001 ENSG00000166436 9606 - 11:8612037-8671866 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartOvaryTestisENST00000402157
Transcript ID Brain Colon Heart Ovary Testis
ENST00000402157 0.425±0.00 0.055±0.00 0.046±0.00 0.266±0.00 2.030±1.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00049G CIL_00049G_0001 CGP 11:8391868-8671866
CIL_0008Q2 CIL_0008Q2_0001 VISTA 11:8432154-9033661
CIL_00049H CIL_00049H_0001 CGP 11:8612037-8714759

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003682 IEA chromatin binding
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0008270 IEA zinc ion binding
GO:0010369 IEA chromocenter
GO:0016235 IDA aggresome
GO:0042803 IEA protein homodimerization activity
GO:0045892 IEA negative regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106739 Trim66-001 protein_coding Mus_musculus 0 4331
ENSMUST00000033339 Trim66-003 protein_coding Mus_musculus 0 4272
ENSMUST00000106741 Trim66-002 protein_coding Mus_musculus 0 4272
ENSMUST00000137704 Trim66-004 processed_transcript Mus_musculus 0 318

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