C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00049G_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130413-ENSG00000166436 CGP 9606 11:8391868-8671866
GeneTranscriptPositionBiotype
ENSG00000166436 (TRIM66)
tripartite motif containing 66 		ENST00000299550 (TRIM66-201) 8612037-8658836 protein_coding
ENST00000402157 (TRIM66-001) 8612037-8671866 protein_coding
ENST00000481014 (TRIM66-002) 8615539-8658836 retained_intron
ENST00000525788 (TRIM66-007) 8617764-8621043 retained_intron
ENST00000529057 (TRIM66-004) 8645722-8648066 processed_transcript
ENST00000529211 (TRIM66-006) 8617569-8619284 retained_intron
ENST00000530502 (TRIM66-005) 8618877-8622845 protein_coding
ENST00000531498 (TRIM66-003) 8644330-8671866 processed_transcript
CIL_00049G_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031027-ENSMUSG00000031026 CGP 10090 7:109279223-109508134
GeneTranscriptPositionBiotype
ENSMUSG00000031026 (Trim66)
tripartite motif-containing 66 		ENSMUST00000033339 (Trim66-003) 109453491-109508134 protein_coding
ENSMUST00000106739 (Trim66-001) 109449006-109493738 protein_coding
ENSMUST00000106741 (Trim66-002) 109453491-109508134 protein_coding
ENSMUST00000137704 (Trim66-004) 109469711-109475134 processed_transcript
ENSMUSG00000031027 (Stk33)
serine/threonine kinase 33 		ENSMUST00000090414 (Stk33-002) 109279223-109439081 protein_coding
ENSMUST00000106745 (Stk33-001) 109279223-109439076 protein_coding
ENSMUST00000121378 (Stk33-005) 109279595-109438998 protein_coding
ENSMUST00000121748 (Stk33-003) 109279223-109438817 protein_coding
ENSMUST00000141210 (Stk33-004) 109279223-109439081 processed_transcript
ENSMUSG00000081370 (Gm9105)
predicted gene 9105 		ENSMUST00000120160 (Gm9105-001) 109387478-109388875 processed_pseudogene
ENSMUSG00000085407 (1700095J03Rik)
RIKEN cDNA 1700095J03 gene 		ENSMUST00000143715 (1700095J03Rik-001) 109438618-109444893 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049G_0001ENSG00000166436ENST00000299550ENST00000402157ENST00000481014ENST00000525788ENST00000529057ENST00000529211ENST00000530502ENST00000531498CIL_00049G_0002ENSMUSG00000031026ENSMUST00000033339ENSMUST00000106739ENSMUST00000106741ENSMUST00000137704ENSMUSG00000031027ENSMUST00000090414ENSMUST00000106745ENSMUST00000121378ENSMUST00000121748ENSMUST00000141210ENSMUSG00000081370ENSMUST00000120160ENSMUSG00000085407ENSMUST00000143715
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00049G_0001ENSG00000166436ENST00000299550ENST00000402157ENST00000481014ENST00000525788ENST00000529211ENST00000530502CIL_00049G_0002ENSMUSG00000031026ENSMUST00000033339ENSMUST00000106739ENSMUST00000106741ENSMUSG00000031027ENSMUST00000090414ENSMUST00000106745ENSMUST00000121378ENSMUST00000121748ENSMUST00000141210ENSMUSG00000081370ENSMUST00000120160ENSMUSG00000085407ENSMUST00000143715
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166436 ENST00000299550 N/A 0.481±0.00 N/A 0.242±0.00 0.435±0.00 N/A N/A 0.426±0.00 N/A N/A N/A N/A 0.182±0.00 2.356±0.00
ENST00000402157 N/A N/A N/A 0.425±0.00 N/A 0.055±0.00 0.046±0.00 N/A N/A N/A N/A 0.266±0.00 N/A 2.030±1.42
ENST00000481014 N/A N/A N/A N/A 0.369±0.00 N/A 0.093±0.00 0.250±0.00 N/A N/A 0.069±0.02 0.502±0.00 N/A 2.018±0.00
ENST00000525788 N/A N/A N/A N/A N/A N/A N/A 2.364±0.00 N/A N/A 0.431±0.00 N/A N/A N/A
ENST00000529057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529211 N/A N/A N/A 0.959±0.00 N/A N/A N/A N/A 0.775±0.00 N/A N/A N/A N/A N/A
ENST00000530502 N/A N/A N/A N/A N/A N/A 0.260±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000531498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031026 ENSMUST00000033339 N/A 0.054±0.00 N/A N/A N/A 0.023±0.00 N/A 0.011±0.00 0.018±0.01 N/A 0.059±0.00 N/A N/A 5.419±2.29
ENSMUST00000106739 0.047±0.02 0.096±0.03 N/A 0.440±0.01 0.139±0.02 0.042±0.02 0.029±0.00 0.012±0.01 0.019±0.01 0.055±0.02 0.021±0.01 0.174±0.06 0.015±0.01 1.685±0.65
ENSMUST00000106741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.417±0.30
ENSMUST00000137704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031027 ENSMUST00000090414 0.136±0.00 N/A N/A 0.681±0.12 N/A N/A 0.048±0.02 N/A N/A 0.414±0.18 0.020±0.00 0.242±0.15 0.299±0.12 51.581±44.18
ENSMUST00000106745 N/A 0.077±0.01 N/A N/A N/A N/A N/A N/A N/A 0.373±0.09 N/A N/A 0.056±0.00 N/A
ENSMUST00000121378 N/A 0.172±0.00 0.131±0.02 1.139±0.63 N/A 0.083±0.00 N/A N/A 0.008±0.00 N/A N/A 0.344±0.15 0.213±0.14 N/A
ENSMUST00000121748 N/A 0.085±0.00 N/A N/A 0.021±0.00 N/A N/A 0.055±0.02 N/A 0.781±0.16 N/A 0.137±0.02 0.095±0.03 32.190±3.77
ENSMUST00000141210 0.079±0.04 N/A 0.067±0.01 0.721±0.59 0.055±0.00 N/A N/A 0.052±0.01 0.017±0.01 0.482±0.09 0.028±0.00 0.246±0.07 0.300±0.00 N/A
ENSMUSG00000081370 ENSMUST00000120160 0.065±0.04 N/A 0.005±0.00 0.093±0.01 0.078±0.03 N/A 0.024±0.00 N/A N/A 0.096±0.00 N/A 0.189±0.00 0.003±0.00 0.196±0.08
ENSMUSG00000085407 ENSMUST00000143715 0.144±0.12 0.125±0.06 0.072±0.00 1.245±0.04 0.074±0.06 0.038±0.01 0.039±0.02 0.030±0.01 0.008±0.00 0.755±0.13 N/A 0.304±0.15 0.181±0.10 29.773±2.71

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