C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 38, member 8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166558 SLC38A8 9606 - 16:84009667-84042636 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000299709 SLC38A8-001 84009784-84042157 protein_coding
  ENST00000568003 SLC38A8-004 84009667-84016756 retained_intron
  ENST00000568178 SLC38A8-002 84022794-84042636 protein_coding
  ENST00000569816 SLC38A8-003 84033381-84041356 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverLungOvaryTestisENST00000299709ENST00000568003ENST00000568178
Transcript ID Brain Heart Liver Lung Ovary Testis
ENST00000299709 N/A 0.118±0.00 0.112±0.00 N/A 0.066±0.00 0.165±0.00
ENST00000568003 2.016±0.00 0.287±0.00 N/A N/A 0.146±0.00 0.898±0.51
ENST00000568178 N/A N/A N/A 0.136±0.00 0.122±0.00 0.033±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Y4 CIL_0004Y4_0002 CGP 16:83968632-84042636
CIL_00057A CIL_00057A_0002 CGP 16:84009667-84116906

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003333 IEA amino acid transmembrane transport
GO:0006814 IEA sodium ion transport
GO:0006865 IEA amino acid transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009482 SLC38A8 (1 of 2) solute carrier family 38, member 8 protein_coding Danio_rerio
ENSDARG00000054196 CR352249.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000034224 Slc38a8 solute carrier family 38, member 8 protein_coding Mus_musculus

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