C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004Y4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000056745-ENSDARG00000009482 CGP 7955 18:21189505-21420946
GeneTranscriptPositionBiotype
ENSDARG00000009482 (SLC38A8 (1 of 2))
solute carrier family 38, member 8 		ENSDART00000100857 (SLC38A8 (1 of 2)-201) 21403125-21420946 protein_coding
ENSDARG00000056745 (necab2)
N-terminal EF-hand calcium binding protein 2 		ENSDART00000100853 (necab2-201) 21189523-21371720 protein_coding
ENSDART00000140161 (necab2-001) 21189505-21401527 protein_coding
ENSDART00000144523 (necab2-002) 21189514-21273346 retained_intron
CIL_0004Y4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000103154-ENSG00000166558 CGP 9606 16:83968632-84042636
GeneTranscriptPositionBiotype
ENSG00000103154 (NECAB2)
N-terminal EF-hand calcium binding protein 2 		ENST00000305202 (NECAB2-001) 83968632-84002776 protein_coding
ENST00000564166 (NECAB2-005) 83998252-84002776 protein_coding
ENST00000565691 (NECAB2-002) 83971451-84002776 protein_coding
ENST00000566836 (NECAB2-004) 83978545-83998285 protein_coding
ENST00000567703 (NECAB2-003) 83993403-83998298 processed_transcript
ENSG00000166558 (SLC38A8)
solute carrier family 38, member 8 		ENST00000299709 (SLC38A8-001) 84009784-84042157 protein_coding
ENST00000568003 (SLC38A8-004) 84009667-84016756 retained_intron
ENST00000568178 (SLC38A8-002) 84022794-84042636 protein_coding
ENST00000569816 (SLC38A8-003) 84033381-84041356 protein_coding
CIL_0004Y4_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031837-ENSMUSG00000034224 CGP 10090 8:119446719-119501698
GeneTranscriptPositionBiotype
ENSMUSG00000031837 (Necab2)
N-terminal EF-hand calcium binding protein 2 		ENSMUST00000098363 (Necab2-001) 119446719-119472640 protein_coding
ENSMUST00000131074 (Necab2-002) 119446761-119472411 processed_transcript
ENSMUST00000148328 (Necab2-003) 119452432-119470945 protein_coding
ENSMUSG00000034224 (Slc38a8)
solute carrier family 38, member 8 		ENSMUST00000036748 (Slc38a8-001) 119479602-119501698 protein_coding
ENSMUST00000125594 (Slc38a8-005) 119486099-119494895 retained_intron
ENSMUST00000132838 (Slc38a8-004) 119485521-119496987 protein_coding
ENSMUST00000133821 (Slc38a8-002) 119496085-119501695 protein_coding
ENSMUST00000138061 (Slc38a8-003) 119494200-119501294 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004Y4_0001ENSDARG00000009482ENSDART00000100857ENSDARG00000056745ENSDART00000100853ENSDART00000140161ENSDART00000144523CIL_0004Y4_0002ENSG00000103154ENST00000305202ENST00000564166ENST00000565691ENST00000566836ENST00000567703ENSG00000166558ENST00000299709ENST00000568003ENST00000568178ENST00000569816CIL_0004Y4_0003ENSMUSG00000031837ENSMUST00000098363ENSMUST00000131074ENSMUST00000148328ENSMUSG00000034224ENSMUST00000036748ENSMUST00000125594ENSMUST00000132838ENSMUST00000133821ENSMUST00000138061
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004Y4_0001ENSDARG00000009482ENSDART00000100857ENSDARG00000056745ENSDART00000100853ENSDART00000140161CIL_0004Y4_0002ENSG00000103154ENST00000305202ENST00000564166ENST00000565691ENST00000566836ENST00000567703ENSG00000166558ENST00000299709ENST00000568003ENST00000568178CIL_0004Y4_0003ENSMUSG00000031837ENSMUST00000098363ENSMUST00000131074ENSMUST00000148328ENSMUSG00000034224ENSMUST00000036748ENSMUST00000125594ENSMUST00000132838ENSMUST00000133821ENSMUST00000138061
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000009482 ENSDART00000100857 N/A N/A N/A 0.132±0.05 N/A N/A 0.181±0.13 N/A N/A N/A 0.057±0.00 N/A N/A N/A
ENSDARG00000056745 ENSDART00000100853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.576±0.00 N/A N/A N/A
ENSDART00000140161 N/A N/A N/A 51.517±3.13 N/A N/A 0.463±0.22 0.146±0.09 0.025±0.00 N/A 1.556±0.00 N/A N/A N/A
ENSDART00000144523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103154 ENST00000305202 0.063±0.00 0.128±0.00 N/A 9.353±5.43 0.723±0.00 N/A 0.221±0.00 0.283±0.00 0.248±0.00 0.062±0.00 0.066±0.00 0.706±0.00 N/A 3.132±0.19
ENST00000564166 N/A N/A N/A N/A N/A 0.146±0.00 N/A 1.183±0.00 N/A 0.270±0.00 N/A N/A 0.383±0.00 1.961±0.00
ENST00000565691 N/A 0.175±0.00 N/A N/A 0.091±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.434±0.00
ENST00000566836 N/A N/A N/A N/A N/A 0.345±0.00 0.207±0.00 N/A 0.823±0.00 N/A N/A 0.118±0.00 N/A N/A
ENST00000567703 0.094±0.00 N/A 1.754±0.00 N/A N/A N/A N/A N/A N/A 0.348±0.00 N/A N/A 0.215±0.00 N/A
ENSG00000166558 ENST00000299709 N/A N/A N/A N/A N/A N/A 0.118±0.00 N/A 0.112±0.00 N/A N/A 0.066±0.00 N/A 0.165±0.00
ENST00000568003 N/A N/A N/A 2.016±0.00 N/A N/A 0.287±0.00 N/A N/A N/A N/A 0.146±0.00 N/A 0.898±0.51
ENST00000568178 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.136±0.00 N/A 0.122±0.00 N/A 0.033±0.00
ENST00000569816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031837 ENSMUST00000098363 0.072±0.06 1.980±0.73 N/A 6.545±4.18 0.170±0.04 0.182±0.14 0.020±0.01 0.035±0.02 0.031±0.01 N/A 0.050±0.02 0.469±0.30 0.498±0.25 5.717±0.06
ENSMUST00000131074 0.249±0.13 1.221±0.00 N/A 13.648±12.72 0.228±0.11 0.254±0.00 N/A 0.053±0.01 0.039±0.00 N/A N/A 0.304±0.07 0.455±0.00 N/A
ENSMUST00000148328 0.040±0.00 N/A N/A 38.448±0.00 0.269±0.01 N/A N/A 0.060±0.04 0.048±0.02 N/A N/A 1.051±0.00 0.609±0.00 N/A
ENSMUSG00000034224 ENSMUST00000036748 0.014±0.00 0.050±0.02 0.018±0.00 0.028±0.01 0.049±0.03 0.037±0.02 0.028±0.02 0.019±0.01 0.013±0.01 0.013±0.00 N/A 0.452±0.26 0.137±0.01 N/A
ENSMUST00000125594 N/A N/A N/A N/A N/A 0.086±0.03 N/A 0.031±0.00 N/A N/A N/A 0.428±0.07 N/A N/A
ENSMUST00000132838 0.059±0.00 0.069±0.02 0.022±0.00 0.092±0.00 0.066±0.01 0.072±0.04 N/A N/A 0.013±0.00 0.046±0.01 N/A 0.400±0.23 N/A N/A
ENSMUST00000133821 N/A N/A N/A N/A 0.034±0.00 N/A N/A 0.034±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000138061 N/A N/A 0.015±0.00 N/A N/A 0.046±0.01 N/A N/A N/A N/A N/A 0.936±0.00 N/A 0.278±0.00

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