C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 38, member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000299709 SLC38A8-001 ENSG00000166558 9606 - 16:84009784-84042157 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverOvaryTestisENST00000299709
Transcript ID Heart Liver Ovary Testis
ENST00000299709 0.118±0.00 0.112±0.00 0.066±0.00 0.165±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004Y4 CIL_0004Y4_0002 CGP 16:83968632-84042636
CIL_00057A CIL_00057A_0002 CGP 16:84009667-84116906

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003333 IEA amino acid transmembrane transport
GO:0006814 IEA sodium ion transport
GO:0006865 IEA amino acid transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036748 Slc38a8-001 protein_coding Mus_musculus 0 1184
ENSMUST00000132838 Slc38a8-004 protein_coding Mus_musculus 0 621
ENSMUST00000138061 Slc38a8-003 protein_coding Mus_musculus 0 562
ENSMUST00000133821 Slc38a8-002 protein_coding Mus_musculus 0 444
ENSMUST00000125594 Slc38a8-005 retained_intron Mus_musculus 0 322

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