C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nudE neurodevelopment protein 1-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166579 NDEL1 9606 + 17:8413131-8490411 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000334527 NDEL1-001 8435861-8468160 protein_coding
  ENST00000380025 NDEL1-003 8435900-8468160 protein_coding
  ENST00000402554 NDEL1-002 8435908-8467658 protein_coding
  ENST00000578172 NDEL1-005 8464236-8468162 retained_intron
  ENST00000579150 NDEL1-008 8413132-8432167 processed_transcript
  ENST00000579880 NDEL1-009 8435861-8446780 processed_transcript
  ENST00000580012 NDEL1-014 8436094-8445801 protein_coding
  ENST00000580237 NDEL1-010 8413195-8446884 nonsense_mediated_decay
  ENST00000580738 NDEL1-017 8435927-8446045 retained_intron
  ENST00000581189 NDEL1-015 8436651-8448577 processed_transcript
  ENST00000581679 NDEL1-006 8450781-8490411 protein_coding
  ENST00000582277 NDEL1-018 8448604-8461384 protein_coding
  ENST00000582490 NDEL1-013 8435922-8445840 protein_coding
  ENST00000582665 NDEL1-011 8435852-8448635 protein_coding
  ENST00000582812 NDEL1-007 8413131-8448597 protein_coding
  ENST00000583066 NDEL1-016 8436034-8445747 processed_transcript
  ENST00000583683 NDEL1-004 8462777-8468153 retained_intron
  ENST00000584866 NDEL1-012 8435914-8445724 protein_coding
  ENST00000585098 NDEL1-019 8435894-8467269 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000334527ENST00000402554ENST00000578172ENST00000582277
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000334527 N/A 7.555±0.00 N/A 6.232±0.00 6.384±0.00 6.968±0.00 N/A 3.075±0.00 N/A 18.615±2.30 17.993±1.58 17.039±0.00
ENST00000402554 17.214±0.00 N/A 16.725±3.77 7.537±0.79 8.095±1.64 2.091±0.00 7.262±0.00 8.723±0.00 3.831±0.00 9.251±0.00 N/A N/A
ENST00000578172 N/A N/A N/A N/A 3.083±0.00 N/A N/A N/A 2.037±0.00 N/A N/A N/A
ENST00000582277 N/A N/A N/A N/A N/A N/A N/A N/A 6.320±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AZ CIL_0009AZ_0001 VISTA 17:8380027-8982000
CIL_00088C CIL_00088C_0001 VISTA 17:8397056-8997791

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000226 IEA microtubule cytoskeleton organization
GO:0000278 TAS mitotic cell cycle
GO:0000776 IDA kinetochore
GO:0001764 IEA neuron migration
GO:0001833 IEA inner cell mass cell proliferation
GO:0005515 IPI protein binding
GO:0005635 IEA nuclear envelope
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005813 IEA centrosome
GO:0005815 IEA microtubule organizing center
GO:0005829 TAS cytosol
GO:0005871 IEA kinesin complex
GO:0005874 IEA microtubule
GO:0005875 IEA microtubule associated complex
GO:0006508 IEA proteolysis
GO:0007059 IMP chromosome segregation
GO:0007100 IEA mitotic centrosome separation
GO:0008017 IEA microtubule binding
GO:0008090 IEA retrograde axon cargo transport
GO:0010975 IEA regulation of neuron projection development
GO:0016477 IEA cell migration
GO:0021799 IEA cerebral cortex radially oriented cell migration
GO:0021955 IEA central nervous system neuron axonogenesis
GO:0030424 IEA axon
GO:0031175 IEA neuron projection development
GO:0031252 IEA cell leading edge
GO:0032403 IEA protein complex binding
GO:0032864 IEA activation of Cdc42 GTPase activity
GO:0043014 IEA alpha-tubulin binding
GO:0043203 IEA axon hillock
GO:0044297 IEA cell body
GO:0045773 IEA positive regulation of axon extension
GO:0047496 IEA vesicle transport along microtubule
GO:0048487 IEA beta-tubulin binding
GO:0048680 IEA positive regulation of axon regeneration
GO:0051081 IEA nuclear envelope disassembly
GO:0051642 IEA centrosome localization
GO:0060052 IEA neurofilament cytoskeleton organization
GO:0060053 IEA neurofilament cytoskeleton
GO:0070012 IEA oligopeptidase activity
GO:1990138 IEA neuron projection extension

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010953 ndel1a nudE nuclear distribution gene E homolog like 1 (A. nidulans) A protein_coding Danio_rerio
ENSDARG00000038190 ndel1b nudE nuclear distribution gene E homolog like 1 (A. nidulans) B protein_coding Danio_rerio
ENSMUSG00000018736 Ndel1 nuclear distribution gene E-like homolog 1 (A. nidulans) protein_coding Mus_musculus

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