C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nudE neurodevelopment protein 1-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000402554 NDEL1-002 ENSG00000166579 9606 + 17:8435908-8467658 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverMuscleOvaryENST00000402554
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Muscle Ovary
ENST00000402554 17.214±0.00 16.725±3.77 7.537±0.79 8.095±1.64 2.091±0.00 7.262±0.00 8.723±0.00 3.831±0.00 9.251±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AZ CIL_0009AZ_0001 VISTA 17:8380027-8982000
CIL_00088C CIL_00088C_0001 VISTA 17:8397056-8997791

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000776 IDA kinetochore
GO:0005515 IPI protein binding
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005874 IEA microtubule
GO:0007059 IMP chromosome segregation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018880 Ndel1-001 protein_coding Mus_musculus 0 1469
ENSMUST00000108672 Ndel1-002 protein_coding Mus_musculus 0 1437
ENSMUST00000101017 Ndel1-003 protein_coding Mus_musculus 0 1314
ENSMUST00000143899 Ndel1-004 processed_transcript Mus_musculus 0 1279
ENSMUST00000144300 Ndel1-005 processed_transcript Mus_musculus 0 1016
ENSMUST00000127469 Ndel1-006 processed_transcript Mus_musculus 0 798

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