C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: component of oligomeric golgi complex 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166685 COG1 9606 + 17:73192632-73208507 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000299886 COG1-001 73192990-73208507 protein_coding
  ENST00000438720 COG1-002 73193072-73208504 protein_coding
  ENST00000577238 COG1-007 73205938-73207089 retained_intron
  ENST00000577844 COG1-006 73205136-73206188 retained_intron
  ENST00000580271 COG1-008 73205571-73207089 retained_intron
  ENST00000582512 COG1-010 73205615-73208420 protein_coding
  ENST00000582587 COG1-005 73193093-73197081 nonsense_mediated_decay
  ENST00000582672 COG1-011 73206159-73207931 protein_coding
  ENST00000582973 COG1-009 73206741-73208507 nonsense_mediated_decay
  ENST00000618996 COG1-201 73192632-73208503 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000299886ENST00000618996
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000299886 10.265±0.00 12.528±0.00 1.685±0.00 10.290±4.32 11.246±0.00 5.077±1.51 5.356±3.95 11.052±0.00 3.806±0.97 5.012±2.39 9.310±0.00 7.972±3.70 10.229±3.37 22.261±0.00
ENST00000618996 N/A N/A N/A N/A 1.884±0.00 N/A N/A N/A N/A N/A 4.963±1.78 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R4 CIL_0007R4_0001 VISTA 17:72990906-73592358
CIL_000678 CIL_000678_0001 CGP 17:73165012-73208507
CIL_000679 CIL_000679_0001 CGP 17:73192632-73236753

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005794 IDA Golgi apparatus
GO:0006891 NAS intra-Golgi vesicle-mediated transport
GO:0007030 NAS Golgi organization
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0017119 NAS Golgi transport complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074735 cog1 component of oligomeric golgi complex 1 protein_coding Danio_rerio
ENSMUSG00000018661 Cog1 component of oligomeric golgi complex 1 protein_coding Mus_musculus

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