C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: component of oligomeric golgi complex 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018661 Cog1 10090 + 11:113649169-113667054 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000018805 Cog1-001 113649169-113662947 protein_coding
  ENSMUST00000063776 Cog1-002 113649328-113662399 protein_coding
  ENSMUST00000123085 Cog1-007 113654687-113656249 retained_intron
  ENSMUST00000134418 Cog1-004 113657530-113661665 protein_coding
  ENSMUST00000137878 Cog1-003 113659283-113662400 protein_coding
  ENSMUST00000142069 Cog1-006 113657512-113661629 protein_coding
  ENSMUST00000148736 Cog1-008 113657375-113667054 protein_coding
  ENSMUST00000152653 Cog1-005 113658578-113662400 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000018805
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000018805 8.375±4.05 8.241±1.88 12.403±0.00 28.453±6.48 5.554±1.48 12.893±5.72 1.718±0.42 8.126±2.65 5.711±3.29 7.718±2.55 3.856±0.00 5.153±0.81 2.964±0.99 28.412±4.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00067E CIL_00067E_0002 CGP 11:112782224-113650079
CIL_00067F CIL_00067F_0002 CGP 11:113244853-113650079
CIL_0007R4 CIL_0007R4_0002 VISTA 11:113433041-114034346
CIL_000678 CIL_000678_0002 CGP 11:113619342-113667054
CIL_000679 CIL_000679_0002 CGP 11:113649169-113684155

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005794 IEA Golgi apparatus
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074735 cog1 component of oligomeric golgi complex 1 protein_coding Danio_rerio
ENSG00000166685 COG1 component of oligomeric golgi complex 1 protein_coding Homo_sapiens

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