C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000678_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000180616-ENSG00000166685 CGP 9606 17:73165012-73208507
GeneTranscriptPositionBiotype
ENSG00000133193 (FAM104A)
family with sequence similarity 104, member A 		ENST00000403627 (FAM104A-002) 73207353-73232367 protein_coding
ENST00000405159 (FAM104A-001) 73207353-73232371 protein_coding
ENST00000579872 (FAM104A-005) 73209575-73227700 protein_coding
ENST00000580032 (FAM104A-007) 73209508-73227748 protein_coding
ENST00000581110 (FAM104A-004) 73209566-73232394 protein_coding
ENST00000583024 (FAM104A-006) 73209605-73232320 protein_coding
ENST00000583178 (FAM104A-003) 73209488-73236753 processed_transcript
ENSG00000166685 (COG1)
component of oligomeric golgi complex 1 		ENST00000299886 (COG1-001) 73192990-73208507 protein_coding
ENST00000438720 (COG1-002) 73193072-73208504 protein_coding
ENST00000577238 (COG1-007) 73205938-73207089 retained_intron
ENST00000577844 (COG1-006) 73205136-73206188 retained_intron
ENST00000580271 (COG1-008) 73205571-73207089 retained_intron
ENST00000582512 (COG1-010) 73205615-73208420 protein_coding
ENST00000582587 (COG1-005) 73193093-73197081 nonsense_mediated_decay
ENST00000582672 (COG1-011) 73206159-73207931 protein_coding
ENST00000582973 (COG1-009) 73206741-73208507 nonsense_mediated_decay
ENST00000618996 (COG1-201) 73192632-73208503 protein_coding
ENSG00000180616 (SSTR2)
somatostatin receptor 2 		ENST00000357585 (SSTR2-001) 73165012-73176633 protein_coding
ENST00000579323 (SSTR2-004) 73165012-73169311 processed_transcript

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_000678_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047904-ENSMUSG00000018661 CGP 10090 11:113619342-113667054
GeneTranscriptPositionBiotype
ENSMUSG00000018661 (Cog1)
component of oligomeric golgi complex 1 		ENSMUST00000018805 (Cog1-001) 113649169-113662947 protein_coding
ENSMUST00000063776 (Cog1-002) 113649328-113662399 protein_coding
ENSMUST00000123085 (Cog1-007) 113654687-113656249 retained_intron
ENSMUST00000134418 (Cog1-004) 113657530-113661665 protein_coding
ENSMUST00000137878 (Cog1-003) 113659283-113662400 protein_coding
ENSMUST00000142069 (Cog1-006) 113657512-113661629 protein_coding
ENSMUST00000148736 (Cog1-008) 113657375-113667054 protein_coding
ENSMUST00000152653 (Cog1-005) 113658578-113662400 nonsense_mediated_decay
ENSMUSG00000041629 (Fam104a)
family with sequence similarity 104, member A 		ENSMUST00000120194 (Fam104a-001) 113661319-113684155 protein_coding
ENSMUSG00000041654 (Slc39a11)
solute carrier family 39 (metal ion transporter), member 11 		ENSMUST00000042657 (Slc39a11-002) 113244853-113565768 protein_coding
ENSMUST00000071539 (Slc39a11-001) 113244853-113565756 protein_coding
ENSMUST00000106633 (Slc39a11-004) 113244853-113565759 protein_coding
ENSMUST00000123153 (Slc39a11-006) 113577643-113650070 processed_transcript
ENSMUST00000125890 (Slc39a11-007) 113369728-113650071 protein_coding
ENSMUST00000136392 (Slc39a11-008) 113559532-113650070 protein_coding
ENSMUST00000146031 (Slc39a11-005) 113523587-113650079 protein_coding
ENSMUST00000149034 (Slc39a11-003) 113463953-113565779 protein_coding
ENSMUSG00000047904 (Sstr2)
somatostatin receptor 2 		ENSMUST00000067591 (Sstr2-201) 113624257-113625636 protein_coding
ENSMUST00000106630 (Sstr2-001) 113619476-113625895 protein_coding
ENSMUST00000146390 (Sstr2-002) 113619342-113626028 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000678_0001ENSG00000133193ENST00000403627ENST00000405159ENST00000579872ENST00000580032ENST00000581110ENST00000583024ENST00000583178ENSG00000166685ENST00000299886ENST00000438720ENST00000577238ENST00000577844ENST00000580271ENST00000582512ENST00000582587ENST00000582672ENST00000582973ENST00000618996ENSG00000180616ENST00000357585ENST00000579323CIL_000678_0002ENSMUSG00000018661ENSMUST00000018805ENSMUST00000063776ENSMUST00000123085ENSMUST00000134418ENSMUST00000137878ENSMUST00000142069ENSMUST00000148736ENSMUST00000152653ENSMUSG00000041629ENSMUST00000120194ENSMUSG00000041654ENSMUST00000042657ENSMUST00000071539ENSMUST00000106633ENSMUST00000123153ENSMUST00000125890ENSMUST00000136392ENSMUST00000146031ENSMUST00000149034ENSMUSG00000047904ENSMUST00000067591ENSMUST00000106630ENSMUST00000146390
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000678_0001ENSG00000133193ENST00000403627ENST00000405159ENSG00000166685ENST00000299886ENST00000618996ENSG00000180616ENST00000357585CIL_000678_0002ENSMUSG00000018661ENSMUST00000018805ENSMUSG00000041629ENSMUST00000120194ENSMUSG00000041654ENSMUST00000042657ENSMUST00000071539ENSMUST00000106633ENSMUST00000125890ENSMUST00000149034ENSMUSG00000047904ENSMUST00000067591ENSMUST00000106630ENSMUST00000146390
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000133193 ENST00000403627 10.149±0.00 10.176±0.00 N/A 10.571±0.00 9.916±0.00 6.057±0.00 3.304±1.93 3.907±2.48 2.785±0.00 3.336±1.41 6.598±0.00 9.164±1.19 12.838±2.73 22.190±0.00
ENST00000405159 N/A 5.455±0.00 0.975±0.00 N/A 2.870±0.00 N/A N/A N/A 1.715±0.00 2.886±0.00 N/A N/A 4.308±0.00 33.215±4.37
ENST00000579872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166685 ENST00000299886 10.265±0.00 12.528±0.00 1.685±0.00 10.290±4.32 11.246±0.00 5.077±1.51 5.356±3.95 11.052±0.00 3.806±0.97 5.012±2.39 9.310±0.00 7.972±3.70 10.229±3.37 22.261±0.00
ENST00000438720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618996 N/A N/A N/A N/A 1.884±0.00 N/A N/A N/A N/A N/A 4.963±1.78 N/A N/A N/A
ENSG00000180616 ENST00000357585 4.610±0.00 2.464±0.00 0.739±0.00 3.841±1.25 N/A 1.424±0.00 N/A 5.469±0.00 0.657±0.00 1.395±0.00 N/A N/A N/A N/A
ENST00000579323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018661 ENSMUST00000018805 8.375±4.05 8.241±1.88 12.403±0.00 28.453±6.48 5.554±1.48 12.893±5.72 1.718±0.42 8.126±2.65 5.711±3.29 7.718±2.55 3.856±0.00 5.153±0.81 2.964±0.99 28.412±4.51
ENSMUST00000063776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137878 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000041629 ENSMUST00000120194 15.133±2.79 39.722±8.21 19.501±1.27 22.349±10.49 19.418±3.95 30.362±3.31 6.760±1.38 15.787±2.98 15.093±6.27 17.914±3.70 12.036±1.23 25.059±7.46 13.507±3.90 52.246±26.81
ENSMUSG00000041654 ENSMUST00000042657 N/A 2.058±0.23 N/A N/A N/A N/A 0.406±0.21 N/A 1.824±0.00 N/A N/A N/A N/A 0.555±0.00
ENSMUST00000071539 4.545±0.78 4.777±1.75 3.968±1.60 2.048±0.24 4.696±1.39 34.004±2.52 0.763±0.14 8.281±1.84 5.736±2.36 5.047±0.91 0.777±0.26 7.147±0.93 3.795±1.24 1.141±0.37
ENSMUST00000106633 2.738±1.00 3.377±1.13 1.109±0.00 3.984±2.06 3.462±1.27 6.967±1.25 0.353±0.06 2.659±0.81 2.674±1.22 N/A 0.263±0.09 2.848±0.98 2.738±0.21 2.693±1.23
ENSMUST00000123153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125890 5.350±0.00 10.134±1.59 N/A N/A 7.120±1.13 22.978±4.77 N/A 7.152±0.49 N/A 6.724±0.00 N/A 8.432±2.02 N/A 3.455±0.33
ENSMUST00000136392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.644±0.00 N/A N/A N/A
ENSMUSG00000047904 ENSMUST00000067591 0.006±0.00 0.426±0.14 N/A 5.764±3.26 0.050±0.02 2.550±0.64 N/A 0.302±0.00 0.218±0.36 0.601±0.19 N/A 0.421±0.23 0.089±0.04 0.434±0.16
ENSMUST00000106630 0.043±0.01 N/A 0.013±0.00 N/A 0.053±0.00 N/A N/A N/A 0.495±0.30 N/A N/A N/A 0.076±0.00 0.146±0.00
ENSMUST00000146390 0.030±0.01 0.880±0.24 0.067±0.03 9.969±6.47 0.032±0.00 1.720±0.38 N/A 0.170±0.05 0.990±0.81 0.963±0.24 N/A 0.154±0.09 0.194±0.09 0.180±0.13

Loading