C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000678_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000180616-ENSG00000166685 CGP 9606 17:73165012-73208507
GeneTranscriptPositionBiotype
ENSG00000133193 (FAM104A)
family with sequence similarity 104, member A 		ENST00000403627 (FAM104A-002) 73207353-73232367 protein_coding
ENST00000405159 (FAM104A-001) 73207353-73232371 protein_coding
ENST00000579872 (FAM104A-005) 73209575-73227700 protein_coding
ENST00000580032 (FAM104A-007) 73209508-73227748 protein_coding
ENST00000581110 (FAM104A-004) 73209566-73232394 protein_coding
ENST00000583024 (FAM104A-006) 73209605-73232320 protein_coding
ENST00000583178 (FAM104A-003) 73209488-73236753 processed_transcript
ENSG00000166685 (COG1)
component of oligomeric golgi complex 1 		ENST00000299886 (COG1-001) 73192990-73208507 protein_coding
ENST00000438720 (COG1-002) 73193072-73208504 protein_coding
ENST00000577238 (COG1-007) 73205938-73207089 retained_intron
ENST00000577844 (COG1-006) 73205136-73206188 retained_intron
ENST00000580271 (COG1-008) 73205571-73207089 retained_intron
ENST00000582512 (COG1-010) 73205615-73208420 protein_coding
ENST00000582587 (COG1-005) 73193093-73197081 nonsense_mediated_decay
ENST00000582672 (COG1-011) 73206159-73207931 protein_coding
ENST00000582973 (COG1-009) 73206741-73208507 nonsense_mediated_decay
ENST00000618996 (COG1-201) 73192632-73208503 protein_coding
ENSG00000180616 (SSTR2)
somatostatin receptor 2 		ENST00000357585 (SSTR2-001) 73165012-73176633 protein_coding
ENST00000579323 (SSTR2-004) 73165012-73169311 processed_transcript
CIL_000678_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047904-ENSMUSG00000018661 CGP 10090 11:113619342-113667054
GeneTranscriptPositionBiotype
ENSMUSG00000018661 (Cog1)
component of oligomeric golgi complex 1 		ENSMUST00000018805 (Cog1-001) 113649169-113662947 protein_coding
ENSMUST00000063776 (Cog1-002) 113649328-113662399 protein_coding
ENSMUST00000123085 (Cog1-007) 113654687-113656249 retained_intron
ENSMUST00000134418 (Cog1-004) 113657530-113661665 protein_coding
ENSMUST00000137878 (Cog1-003) 113659283-113662400 protein_coding
ENSMUST00000142069 (Cog1-006) 113657512-113661629 protein_coding
ENSMUST00000148736 (Cog1-008) 113657375-113667054 protein_coding
ENSMUST00000152653 (Cog1-005) 113658578-113662400 nonsense_mediated_decay
ENSMUSG00000041629 (Fam104a)
family with sequence similarity 104, member A 		ENSMUST00000120194 (Fam104a-001) 113661319-113684155 protein_coding
ENSMUSG00000041654 (Slc39a11)
solute carrier family 39 (metal ion transporter), member 11 		ENSMUST00000042657 (Slc39a11-002) 113244853-113565768 protein_coding
ENSMUST00000071539 (Slc39a11-001) 113244853-113565756 protein_coding
ENSMUST00000106633 (Slc39a11-004) 113244853-113565759 protein_coding
ENSMUST00000123153 (Slc39a11-006) 113577643-113650070 processed_transcript
ENSMUST00000125890 (Slc39a11-007) 113369728-113650071 protein_coding
ENSMUST00000136392 (Slc39a11-008) 113559532-113650070 protein_coding
ENSMUST00000146031 (Slc39a11-005) 113523587-113650079 protein_coding
ENSMUST00000149034 (Slc39a11-003) 113463953-113565779 protein_coding
ENSMUSG00000047904 (Sstr2)
somatostatin receptor 2 		ENSMUST00000067591 (Sstr2-201) 113624257-113625636 protein_coding
ENSMUST00000106630 (Sstr2-001) 113619476-113625895 protein_coding
ENSMUST00000146390 (Sstr2-002) 113619342-113626028 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000678_0001ENSG00000133193ENST00000403627ENST00000405159ENST00000579872ENST00000580032ENST00000581110ENST00000583024ENST00000583178ENSG00000166685ENST00000299886ENST00000438720ENST00000577238ENST00000577844ENST00000580271ENST00000582512ENST00000582587ENST00000582672ENST00000582973ENST00000618996ENSG00000180616ENST00000357585ENST00000579323CIL_000678_0002ENSMUSG00000018661ENSMUST00000018805ENSMUST00000063776ENSMUST00000123085ENSMUST00000134418ENSMUST00000137878ENSMUST00000142069ENSMUST00000148736ENSMUST00000152653ENSMUSG00000041629ENSMUST00000120194ENSMUSG00000041654ENSMUST00000042657ENSMUST00000071539ENSMUST00000106633ENSMUST00000123153ENSMUST00000125890ENSMUST00000136392ENSMUST00000146031ENSMUST00000149034ENSMUSG00000047904ENSMUST00000067591ENSMUST00000106630ENSMUST00000146390
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000678_0001ENSG00000133193ENST00000403627ENST00000405159ENSG00000166685ENST00000299886ENST00000618996ENSG00000180616ENST00000357585CIL_000678_0002ENSMUSG00000018661ENSMUST00000018805ENSMUSG00000041629ENSMUST00000120194ENSMUSG00000041654ENSMUST00000042657ENSMUST00000071539ENSMUST00000106633ENSMUST00000125890ENSMUST00000149034ENSMUSG00000047904ENSMUST00000067591ENSMUST00000106630ENSMUST00000146390
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000133193 ENST00000403627 10.149±0.00 10.176±0.00 N/A 10.571±0.00 9.916±0.00 6.057±0.00 3.304±1.93 3.907±2.48 2.785±0.00 3.336±1.41 6.598±0.00 9.164±1.19 12.838±2.73 22.190±0.00
ENST00000405159 N/A 5.455±0.00 0.975±0.00 N/A 2.870±0.00 N/A N/A N/A 1.715±0.00 2.886±0.00 N/A N/A 4.308±0.00 33.215±4.37
ENST00000579872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166685 ENST00000299886 10.265±0.00 12.528±0.00 1.685±0.00 10.290±4.32 11.246±0.00 5.077±1.51 5.356±3.95 11.052±0.00 3.806±0.97 5.012±2.39 9.310±0.00 7.972±3.70 10.229±3.37 22.261±0.00
ENST00000438720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000618996 N/A N/A N/A N/A 1.884±0.00 N/A N/A N/A N/A N/A 4.963±1.78 N/A N/A N/A
ENSG00000180616 ENST00000357585 4.610±0.00 2.464±0.00 0.739±0.00 3.841±1.25 N/A 1.424±0.00 N/A 5.469±0.00 0.657±0.00 1.395±0.00 N/A N/A N/A N/A
ENST00000579323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018661 ENSMUST00000018805 8.375±4.05 8.241±1.88 12.403±0.00 28.453±6.48 5.554±1.48 12.893±5.72 1.718±0.42 8.126±2.65 5.711±3.29 7.718±2.55 3.856±0.00 5.153±0.81 2.964±0.99 28.412±4.51
ENSMUST00000063776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137878 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000041629 ENSMUST00000120194 15.133±2.79 39.722±8.21 19.501±1.27 22.349±10.49 19.418±3.95 30.362±3.31 6.760±1.38 15.787±2.98 15.093±6.27 17.914±3.70 12.036±1.23 25.059±7.46 13.507±3.90 52.246±26.81
ENSMUSG00000041654 ENSMUST00000042657 N/A 2.058±0.23 N/A N/A N/A N/A 0.406±0.21 N/A 1.824±0.00 N/A N/A N/A N/A 0.555±0.00
ENSMUST00000071539 4.545±0.78 4.777±1.75 3.968±1.60 2.048±0.24 4.696±1.39 34.004±2.52 0.763±0.14 8.281±1.84 5.736±2.36 5.047±0.91 0.777±0.26 7.147±0.93 3.795±1.24 1.141±0.37
ENSMUST00000106633 2.738±1.00 3.377±1.13 1.109±0.00 3.984±2.06 3.462±1.27 6.967±1.25 0.353±0.06 2.659±0.81 2.674±1.22 N/A 0.263±0.09 2.848±0.98 2.738±0.21 2.693±1.23
ENSMUST00000123153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125890 5.350±0.00 10.134±1.59 N/A N/A 7.120±1.13 22.978±4.77 N/A 7.152±0.49 N/A 6.724±0.00 N/A 8.432±2.02 N/A 3.455±0.33
ENSMUST00000136392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.644±0.00 N/A N/A N/A
ENSMUSG00000047904 ENSMUST00000067591 0.006±0.00 0.426±0.14 N/A 5.764±3.26 0.050±0.02 2.550±0.64 N/A 0.302±0.00 0.218±0.36 0.601±0.19 N/A 0.421±0.23 0.089±0.04 0.434±0.16
ENSMUST00000106630 0.043±0.01 N/A 0.013±0.00 N/A 0.053±0.00 N/A N/A N/A 0.495±0.30 N/A N/A N/A 0.076±0.00 0.146±0.00
ENSMUST00000146390 0.030±0.01 0.880±0.24 0.067±0.03 9.969±6.47 0.032±0.00 1.720±0.38 N/A 0.170±0.05 0.990±0.81 0.963±0.24 N/A 0.154±0.09 0.194±0.09 0.180±0.13

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