C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cerebral endothelial cell adhesion molecule
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167123 CERCAM 9606 + 9:128411751-128437351 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372838 CERCAM-002 128420480-128437347 protein_coding
  ENST00000372842 CERCAM-005 128411766-128437351 protein_coding
  ENST00000411852 CERCAM-011 128420481-128424182 protein_coding
  ENST00000420034 CERCAM-009 128411751-128423263 protein_coding
  ENST00000420512 CERCAM-001 128419607-128428423 protein_coding
  ENST00000447915 CERCAM-010 128419114-128424273 protein_coding
  ENST00000463535 CERCAM-006 128424036-128434607 retained_intron
  ENST00000472858 CERCAM-014 128430745-128434194 processed_transcript
  ENST00000483737 CERCAM-012 128422915-128424269 retained_intron
  ENST00000483893 CERCAM-013 128424206-128428823 processed_transcript
  ENST00000487001 CERCAM-004 128424602-128435755 processed_transcript
  ENST00000493788 CERCAM-003 128420481-128421510 processed_transcript
  ENST00000612334 CERCAM-201 128422905-128435905 protein_coding
  ENST00000613052 CERCAM-202 128428388-128437344 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372838ENST00000372842ENST00000411852ENST00000420034ENST00000447915ENST00000463535ENST00000472858ENST00000487001ENST00000612334ENST00000613052
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372838 3.222±0.00 3.650±0.00 N/A N/A 1.953±1.12 1.909±0.00 2.949±0.00 4.581±0.00 0.719±0.14 7.433±0.00 0.746±0.00 12.955±3.17 45.340±30.28 3.965±0.00
ENST00000372842 N/A N/A N/A 2.878±0.61 N/A N/A 0.078±0.00 N/A N/A 0.341±0.00 N/A N/A N/A 0.644±0.00
ENST00000411852 N/A N/A N/A N/A N/A N/A N/A 1.687±0.00 N/A N/A N/A N/A N/A N/A
ENST00000420034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.529±0.00 N/A N/A N/A
ENST00000447915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.352±0.00 N/A N/A
ENST00000463535 N/A N/A 1.050±0.00 N/A 0.870±0.00 1.391±0.00 N/A N/A 0.969±0.00 N/A 0.768±0.00 15.781±0.00 64.599±0.00 5.079±0.00
ENST00000472858 N/A N/A N/A N/A N/A N/A N/A 1.187±0.00 N/A N/A 1.441±0.00 N/A N/A N/A
ENST00000487001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.856±0.00 N/A N/A N/A
ENST00000612334 5.267±0.00 5.002±0.00 N/A N/A 3.792±3.06 6.409±0.00 N/A N/A N/A N/A N/A 20.595±3.61 33.629±19.59 9.760±0.00
ENST00000613052 8.179±0.00 12.269±0.00 0.819±0.00 9.827±4.96 7.161±6.56 5.410±4.61 0.556±0.50 1.571±1.33 1.258±0.45 3.098±2.27 N/A 23.149±12.89 70.568±24.16 13.725±6.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ST CIL_0000ST_0002 CGP 9:128371319-128437351
CIL_0007E9 CIL_0007E9_0001 CGP 9:128411751-128501292

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0005886 NAS plasma membrane
GO:0006928 TAS cellular component movement
GO:0007155 IDA cell adhesion
GO:0007159 TAS leukocyte cell-cell adhesion
GO:0009103 IEA lipopolysaccharide biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079049 cercam cerebral endothelial cell adhesion molecule protein_coding Danio_rerio
ENSMUSG00000039787 Cercam cerebral endothelial cell adhesion molecule protein_coding Mus_musculus

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