C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cerebral endothelial cell adhesion molecule
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372838 CERCAM-002 ENSG00000167123 9606 + 9:128420480-128437347 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372838
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372838 3.222±0.00 3.650±0.00 1.953±1.12 1.909±0.00 2.949±0.00 4.581±0.00 0.719±0.14 7.433±0.00 0.746±0.00 12.955±3.17 45.340±30.28 3.965±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ST CIL_0000ST_0002 CGP 9:128371319-128437351
CIL_0007E9 CIL_0007E9_0001 CGP 9:128411751-128501292

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0005886 NAS plasma membrane
GO:0006928 TAS cellular component movement
GO:0007155 IDA cell adhesion
GO:0007159 TAS leukocyte cell-cell adhesion
GO:0009103 IEA lipopolysaccharide biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047521 Cercam-001 protein_coding Mus_musculus 0 1589
ENSMUST00000155355 Cercam-005 retained_intron Mus_musculus 0 305
ENSMUST00000134152 Cercam-004 protein_coding Mus_musculus 9.99967e-42 176

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