C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000ST_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000091198-ENSDARG00000079049 CGP 7955 10:10278920-10346027
GeneTranscriptPositionBiotype
ENSDARG00000079049 (cercam)
cerebral endothelial cell adhesion molecule 		ENSDART00000109432 (cercam-001) 10317581-10346027 protein_coding
ENSDARG00000091198 (urm1)
ubiquitin related modifier 1 		ENSDART00000129952 (urm1-002) 10278940-10291840 protein_coding
ENSDART00000142895 (urm1-001) 10278920-10291921 protein_coding
ENSDARG00000095365 (si:dkeyp-68f6.3)
si:dkeyp-68f6.3 		ENSDART00000134929 (si:dkeyp-68f6.3-001) 10285204-10298323 processed_transcript
CIL_0000ST_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167118-ENSG00000167123 CGP 9606 9:128371319-128437351
GeneTranscriptPositionBiotype
ENSG00000167118 (URM1)
ubiquitin related modifier 1 		ENST00000372847 (URM1-004) 128371371-128388411 protein_coding
ENST00000372850 (URM1-002) 128371361-128390734 protein_coding
ENST00000372853 (URM1-001) 128371319-128390734 protein_coding
ENST00000452446 (URM1-201) 128371381-128392016 protein_coding
ENST00000470840 (URM1-005) 128371361-128390090 nonsense_mediated_decay
ENST00000483206 (URM1-003) 128378067-128389869 processed_transcript
ENSG00000167123 (CERCAM)
cerebral endothelial cell adhesion molecule 		ENST00000372838 (CERCAM-002) 128420480-128437347 protein_coding
ENST00000372842 (CERCAM-005) 128411766-128437351 protein_coding
ENST00000411852 (CERCAM-011) 128420481-128424182 protein_coding
ENST00000420034 (CERCAM-009) 128411751-128423263 protein_coding
ENST00000420512 (CERCAM-001) 128419607-128428423 protein_coding
ENST00000447915 (CERCAM-010) 128419114-128424273 protein_coding
ENST00000463535 (CERCAM-006) 128424036-128434607 retained_intron
ENST00000472858 (CERCAM-014) 128430745-128434194 processed_transcript
ENST00000483737 (CERCAM-012) 128422915-128424269 retained_intron
ENST00000483893 (CERCAM-013) 128424206-128428823 processed_transcript
ENST00000487001 (CERCAM-004) 128424602-128435755 processed_transcript
ENST00000493788 (CERCAM-003) 128420481-128421510 processed_transcript
ENST00000612334 (CERCAM-201) 128422905-128435905 protein_coding
ENST00000613052 (CERCAM-202) 128428388-128437344 protein_coding
ENSG00000207955 (MIR219A2)
microRNA 219a-2 		ENST00000608502 (MIR219A2-001) 128392007-128393510 lincRNA
ENSG00000273186 (RP11-339B21.10)
 ENST00000610052 (RP11-339B21.10-001) 128431598-128432006 sense_intronic
CIL_0000ST_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000069020-ENSMUSG00000039787 CGP 10090 2:29820075-29882840
GeneTranscriptPositionBiotype
ENSMUSG00000039787 (Cercam)
cerebral endothelial cell adhesion molecule 		ENSMUST00000047521 (Cercam-001) 29869494-29882840 protein_coding
ENSMUST00000134152 (Cercam-004) 29869544-29871309 protein_coding
ENSMUST00000153863 (Cercam-003) 29875645-29878338 retained_intron
ENSMUST00000154464 (Cercam-002) 29869164-29871355 protein_coding
ENSMUST00000155355 (Cercam-005) 29876192-29880874 retained_intron
ENSMUSG00000039798 (2600006K01Rik)
RIKEN cDNA 2600006K01 gene 		ENSMUST00000047607 (2600006K01Rik-001) 29868723-29870317 antisense
ENSMUSG00000069020 (Urm1)
ubiquitin related modifier 1 homolog (S. cerevisiae) 		ENSMUST00000091142 (Urm1-001) 29827342-29845002 protein_coding
ENSMUST00000123021 (Urm1-006) 29841648-29844064 retained_intron
ENSMUST00000130542 (Urm1-005) 29827395-29833636 retained_intron
ENSMUST00000147325 (Urm1-003) 29827361-29843421 processed_transcript
ENSMUST00000149379 (Urm1-004) 29820075-29843145 processed_transcript
ENSMUST00000156944 (Urm1-002) 29827342-29843374 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ST_0001ENSDARG00000079049ENSDART00000109432ENSDARG00000091198ENSDART00000129952ENSDART00000142895ENSDARG00000095365ENSDART00000134929CIL_0000ST_0002ENSG00000167118ENST00000372847ENST00000372850ENST00000372853ENST00000452446ENST00000470840ENST00000483206ENSG00000167123ENST00000372838ENST00000372842ENST00000411852ENST00000420034ENST00000420512ENST00000447915ENST00000463535ENST00000472858ENST00000483737ENST00000483893ENST00000487001ENST00000493788ENST00000612334ENST00000613052ENSG00000207955ENST00000608502ENSG00000273186ENST00000610052CIL_0000ST_0003ENSMUSG00000039787ENSMUST00000047521ENSMUST00000134152ENSMUST00000153863ENSMUST00000154464ENSMUST00000155355ENSMUSG00000039798ENSMUST00000047607ENSMUSG00000069020ENSMUST00000091142ENSMUST00000123021ENSMUST00000130542ENSMUST00000147325ENSMUST00000149379ENSMUST00000156944
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ST_0001ENSDARG00000079049ENSDART00000109432ENSDARG00000091198ENSDART00000129952ENSDART00000142895ENSDARG00000095365ENSDART00000134929CIL_0000ST_0002ENSG00000167118ENST00000372847ENST00000372853ENST00000452446ENST00000470840ENST00000483206ENSG00000167123ENST00000372838ENST00000372842ENST00000411852ENST00000420034ENST00000447915ENST00000463535ENST00000472858ENST00000487001ENST00000612334ENST00000613052ENSG00000207955ENST00000608502ENSG00000273186ENST00000610052CIL_0000ST_0003ENSMUSG00000039787ENSMUST00000047521ENSMUST00000155355ENSMUSG00000039798ENSMUST00000047607ENSMUSG00000069020ENSMUST00000091142ENSMUST00000123021ENSMUST00000147325ENSMUST00000149379ENSMUST00000156944
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000079049 ENSDART00000109432 N/A N/A N/A 1.532±0.22 N/A N/A 2.041±0.98 1.839±0.00 0.043±0.00 N/A 0.516±0.00 N/A N/A N/A
ENSDARG00000091198 ENSDART00000129952 N/A N/A N/A 2.397±0.00 N/A N/A 2.114±0.54 2.168±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000142895 N/A N/A N/A 3.825±0.78 N/A N/A 6.255±4.66 3.959±1.47 1.944±0.00 N/A 5.272±0.00 N/A N/A N/A
ENSDARG00000095365 ENSDART00000134929 N/A N/A N/A 0.138±0.00 N/A N/A 0.163±0.03 N/A N/A N/A 0.127±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167118 ENST00000372847 N/A N/A N/A N/A N/A 0.734±0.00 0.349±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000372850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000372853 25.856±0.00 40.781±0.00 1.647±0.00 12.628±8.79 18.742±17.12 14.816±13.41 4.941±3.46 5.609±3.88 3.743±1.68 2.368±0.00 8.596±1.57 22.769±12.21 35.260±4.55 30.817±4.13
ENST00000452446 N/A 3.038±0.00 N/A 0.715±0.00 N/A N/A N/A 1.854±0.00 N/A 0.195±0.00 N/A 1.274±0.88 N/A N/A
ENST00000470840 11.848±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.724±0.00 N/A N/A
ENST00000483206 N/A N/A N/A N/A 1.558±0.00 N/A N/A 0.898±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000167123 ENST00000372838 3.222±0.00 3.650±0.00 N/A N/A 1.953±1.12 1.909±0.00 2.949±0.00 4.581±0.00 0.719±0.14 7.433±0.00 0.746±0.00 12.955±3.17 45.340±30.28 3.965±0.00
ENST00000372842 N/A N/A N/A 2.878±0.61 N/A N/A 0.078±0.00 N/A N/A 0.341±0.00 N/A N/A N/A 0.644±0.00
ENST00000411852 N/A N/A N/A N/A N/A N/A N/A 1.687±0.00 N/A N/A N/A N/A N/A N/A
ENST00000420034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.529±0.00 N/A N/A N/A
ENST00000420512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.352±0.00 N/A N/A
ENST00000463535 N/A N/A 1.050±0.00 N/A 0.870±0.00 1.391±0.00 N/A N/A 0.969±0.00 N/A 0.768±0.00 15.781±0.00 64.599±0.00 5.079±0.00
ENST00000472858 N/A N/A N/A N/A N/A N/A N/A 1.187±0.00 N/A N/A 1.441±0.00 N/A N/A N/A
ENST00000483737 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.856±0.00 N/A N/A N/A
ENST00000493788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612334 5.267±0.00 5.002±0.00 N/A N/A 3.792±3.06 6.409±0.00 N/A N/A N/A N/A N/A 20.595±3.61 33.629±19.59 9.760±0.00
ENST00000613052 8.179±0.00 12.269±0.00 0.819±0.00 9.827±4.96 7.161±6.56 5.410±4.61 0.556±0.50 1.571±1.33 1.258±0.45 3.098±2.27 N/A 23.149±12.89 70.568±24.16 13.725±6.24
ENSG00000207955 ENST00000608502 N/A N/A N/A 13.126±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000273186 ENST00000610052 0.309±0.00 0.843±0.00 N/A 1.050±0.00 1.978±0.00 0.484±0.00 N/A 0.300±0.00 N/A 0.945±0.00 N/A 1.051±0.55 1.104±0.62 0.146±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039787 ENSMUST00000047521 14.607±1.07 9.121±1.50 21.716±0.81 9.350±1.32 10.888±2.17 7.891±1.40 1.994±0.32 1.000±0.22 7.605±8.96 4.016±0.45 1.299±0.33 18.008±7.87 6.367±6.83 2.047±0.90
ENSMUST00000134152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155355 N/A N/A N/A 4.527±0.00 N/A N/A N/A N/A N/A N/A N/A 9.656±0.00 2.497±0.00 N/A
ENSMUSG00000039798 ENSMUST00000047607 N/A N/A N/A 1.881±0.00 N/A N/A N/A N/A 3.778±1.69 N/A 0.702±0.25 N/A N/A N/A
ENSMUSG00000069020 ENSMUST00000091142 5.253±0.97 3.752±1.70 10.720±2.15 7.881±3.54 5.004±1.26 5.026±1.66 4.996±1.35 5.799±1.34 6.181±3.60 5.690±1.70 3.611±1.35 5.404±2.23 6.822±3.28 2.186±1.29
ENSMUST00000123021 2.313±0.49 2.311±0.33 2.120±0.68 2.127±1.02 2.312±0.27 2.056±0.60 1.216±0.13 1.506±0.25 1.770±0.64 1.760±0.23 N/A 2.945±1.09 2.429±0.61 0.662±0.54
ENSMUST00000130542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147325 N/A 6.252±0.83 5.245±0.00 N/A N/A 3.952±0.00 5.300±0.00 5.914±1.00 3.326±0.21 6.156±0.51 4.028±0.52 N/A 6.862±2.62 N/A
ENSMUST00000149379 N/A N/A N/A 9.304±0.00 N/A N/A N/A N/A N/A N/A N/A 11.340±0.00 12.362±2.53 N/A
ENSMUST00000156944 12.168±0.44 18.610±3.38 N/A 8.557±0.00 14.795±3.70 13.901±4.13 N/A 10.290±0.57 8.735±1.56 9.738±2.46 N/A 17.993±3.98 14.692±3.11 5.923±1.99

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