C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cerebral endothelial cell adhesion molecule
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039787 Cercam 10090 + 2:29869164-29882840 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047521 Cercam-001 29869494-29882840 protein_coding
  ENSMUST00000134152 Cercam-004 29869544-29871309 protein_coding
  ENSMUST00000153863 Cercam-003 29875645-29878338 retained_intron
  ENSMUST00000154464 Cercam-002 29869164-29871355 protein_coding
  ENSMUST00000155355 Cercam-005 29876192-29880874 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047521ENSMUST00000155355
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047521 14.607±1.07 9.121±1.50 21.716±0.81 9.350±1.32 10.888±2.17 7.891±1.40 1.994±0.32 1.000±0.22 7.605±8.96 4.016±0.45 1.299±0.33 18.008±7.87 6.367±6.83 2.047±0.90
ENSMUST00000155355 N/A N/A N/A 4.527±0.00 N/A N/A N/A N/A N/A N/A N/A 9.656±0.00 2.497±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000ST CIL_0000ST_0003 CGP 2:29820075-29882840
CIL_0007E9 CIL_0007E9_0002 CGP 2:29869164-29931746

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0007155 IEA cell adhesion
GO:0009103 IEA lipopolysaccharide biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079049 cercam cerebral endothelial cell adhesion molecule protein_coding Danio_rerio
ENSG00000167123 CERCAM cerebral endothelial cell adhesion molecule protein_coding Homo_sapiens

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