C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glycerol-3-phosphate dehydrogenase 1 (soluble)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167588 GPD1 9606 + 12:50103819-50111319 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000301149 GPD1-001 50103819-50111319 protein_coding
  ENST00000547190 GPD1-007 50104008-50108108 processed_transcript
  ENST00000547964 GPD1-003 50103982-50106387 nonsense_mediated_decay
  ENST00000548152 GPD1-004 50104347-50107513 processed_transcript
  ENST00000548814 GPD1-002 50104008-50110086 protein_coding
  ENST00000550172 GPD1-005 50105146-50106916 retained_intron
  ENST00000551939 GPD1-006 50104008-50106042 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000301149ENST00000547190ENST00000547964ENST00000548814ENST00000550172
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000301149 113.391±0.00 0.398±0.00 3.713±0.00 2.841±1.32 228.724±222.05 1.697±0.00 2.625±0.05 14.271±0.65 23.512±17.59 3.551±2.56 29.230±8.19 0.151±0.15 0.037±0.00 0.159±0.00
ENST00000547190 N/A N/A N/A 2.187±0.00 6.312±0.00 N/A 5.410±0.00 N/A 6.422±0.00 7.451±0.00 N/A 0.306±0.21 N/A N/A
ENST00000547964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.227±0.00 0.095±0.00 N/A
ENST00000548814 49.380±0.00 N/A N/A 2.985±1.25 108.684±101.82 6.314±0.00 2.985±0.00 11.448±4.03 6.156±0.00 3.252±0.26 36.430±0.00 0.284±0.13 0.086±0.05 0.334±0.00
ENST00000550172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.084±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PE CIL_0008PE_0001 VISTA 12:49905565-50507504
CIL_0008CC CIL_0008CC_0001 VISTA 12:49906068-50507455
CIL_0000F4 CIL_0000F4_0001 CGP 12:50084972-50111319
CIL_0000FK CIL_0000FK_0001 CGP 12:50103819-50120457

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004367 IEA glycerol-3-phosphate dehydrogenase [NAD+] activity
GO:0004368 IEA glycerol-3-phosphate dehydrogenase activity
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005829 TAS cytosol
GO:0005975 IEA carbohydrate metabolic process
GO:0006072 IEA glycerol-3-phosphate metabolic process
GO:0006094 IEA gluconeogenesis
GO:0006116 IEA NADH oxidation
GO:0006127 IEA glycerophosphate shuttle
GO:0006644 TAS phospholipid metabolic process
GO:0006654 TAS phosphatidic acid biosynthetic process
GO:0006734 IEA NADH metabolic process
GO:0009331 IEA glycerol-3-phosphate dehydrogenase complex
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0019432 TAS triglyceride biosynthetic process
GO:0042803 IEA protein homodimerization activity
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045821 IEA positive regulation of glycolytic process
GO:0046168 IEA glycerol-3-phosphate catabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process
GO:0046486 IEA glycerolipid metabolic process
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome
GO:0071320 IEA cellular response to cAMP
GO:0071356 IEA cellular response to tumor necrosis factor

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043180 gpd1b glycerol-3-phosphate dehydrogenase 1b protein_coding Danio_rerio
ENSDARG00000043701 gpd1a glycerol-3-phosphate dehydrogenase 1a protein_coding Danio_rerio
ENSMUSG00000023019 Gpd1 glycerol-3-phosphate dehydrogenase 1 (soluble) protein_coding Mus_musculus

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