C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000FK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167588-ENSG00000178449 CGP 9606 12:50103819-50120457
GeneTranscriptPositionBiotype
ENSG00000167588 (GPD1)
glycerol-3-phosphate dehydrogenase 1 (soluble) 		ENST00000301149 (GPD1-001) 50103819-50111319 protein_coding
ENST00000547190 (GPD1-007) 50104008-50108108 processed_transcript
ENST00000547964 (GPD1-003) 50103982-50106387 nonsense_mediated_decay
ENST00000548152 (GPD1-004) 50104347-50107513 processed_transcript
ENST00000548814 (GPD1-002) 50104008-50110086 protein_coding
ENST00000550172 (GPD1-005) 50105146-50106916 retained_intron
ENST00000551939 (GPD1-006) 50104008-50106042 retained_intron
ENSG00000272368 (RP4-605O3.4)
 ENST00000548468 (RP4-605O3.4-001) 50112197-50165618 antisense
ENST00000552815 (RP4-605O3.4-002) 50112254-50123782 antisense
CIL_0000FK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023019-ENSMUSG00000023020 CGP 10090 15:99717515-99728136
GeneTranscriptPositionBiotype
ENSMUSG00000023019 (Gpd1)
glycerol-3-phosphate dehydrogenase 1 (soluble) 		ENSMUST00000023760 (Gpd1-001) 99717515-99725005 protein_coding
ENSMUST00000161768 (Gpd1-003) 99719996-99722047 retained_intron
ENSMUST00000162194 (Gpd1-002) 99717579-99723792 protein_coding
ENSMUSG00000023020 (Cox14)
cytochrome c oxidase assembly protein 14 		ENSMUST00000023761 (Cox14-201) 99725618-99728136 protein_coding
ENSMUSG00000089671 (Gm16537)
predicted gene 16537 		ENSMUST00000161529 (Gm16537-001) 99715543-99724474 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000FK_0001ENSG00000167588ENST00000301149ENST00000547190ENST00000547964ENST00000548152ENST00000548814ENST00000550172ENST00000551939ENSG00000272368ENST00000548468ENST00000552815CIL_0000FK_0002ENSMUSG00000023019ENSMUST00000023760ENSMUST00000161768ENSMUST00000162194ENSMUSG00000023020ENSMUST00000023761ENSMUSG00000089671ENSMUST00000161529
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000FK_0001ENSG00000167588ENST00000301149ENST00000547190ENST00000547964ENST00000548814ENST00000550172ENSG00000272368ENST00000548468CIL_0000FK_0002ENSMUSG00000023019ENSMUST00000023760ENSMUST00000162194ENSMUSG00000023020ENSMUST00000023761ENSMUSG00000089671ENSMUST00000161529
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167588 ENST00000301149 113.391±0.00 0.398±0.00 3.713±0.00 2.841±1.32 228.724±222.05 1.697±0.00 2.625±0.05 14.271±0.65 23.512±17.59 3.551±2.56 29.230±8.19 0.151±0.15 0.037±0.00 0.159±0.00
ENST00000547190 N/A N/A N/A 2.187±0.00 6.312±0.00 N/A 5.410±0.00 N/A 6.422±0.00 7.451±0.00 N/A 0.306±0.21 N/A N/A
ENST00000547964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.227±0.00 0.095±0.00 N/A
ENST00000548152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548814 49.380±0.00 N/A N/A 2.985±1.25 108.684±101.82 6.314±0.00 2.985±0.00 11.448±4.03 6.156±0.00 3.252±0.26 36.430±0.00 0.284±0.13 0.086±0.05 0.334±0.00
ENST00000550172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.084±0.00 N/A N/A
ENST00000551939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000272368 ENST00000548468 N/A N/A 0.449±0.00 N/A N/A N/A N/A N/A N/A 0.642±0.00 N/A N/A N/A N/A
ENST00000552815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023019 ENSMUST00000023760 418.325±117.07 399.948±90.28 6.309±1.14 5.207±5.50 366.510±141.17 11.428±3.42 57.252±18.91 193.872±16.36 74.414±58.12 41.221±10.47 270.094±12.31 27.847±11.30 0.892±1.15 7.036±2.13
ENSMUST00000161768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162194 N/A N/A N/A N/A N/A 7.155±1.58 N/A N/A N/A N/A N/A N/A 0.050±0.00 N/A
ENSMUSG00000023020 ENSMUST00000023761 84.783±19.68 346.744±44.20 64.630±16.96 58.185±25.46 99.244±44.67 149.304±44.89 127.350±43.06 103.813±27.05 47.981±18.61 62.690±7.74 78.930±13.24 138.398±60.07 45.569±11.97 18.715±7.14
ENSMUSG00000089671 ENSMUST00000161529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.377±0.00 N/A

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