C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycerol-3-phosphate dehydrogenase 1 (soluble)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000548814 GPD1-002 ENSG00000167588 9606 + 12:50104008-50110086 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000548814
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000548814 49.380±0.00 2.985±1.25 108.684±101.82 6.314±0.00 2.985±0.00 11.448±4.03 6.156±0.00 3.252±0.26 36.430±0.00 0.284±0.13 0.086±0.05 0.334±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PE CIL_0008PE_0001 VISTA 12:49905565-50507504
CIL_0008CC CIL_0008CC_0001 VISTA 12:49906068-50507455
CIL_0000F4 CIL_0000F4_0001 CGP 12:50084972-50111319
CIL_0000FK CIL_0000FK_0001 CGP 12:50103819-50120457

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004367 IEA glycerol-3-phosphate dehydrogenase [NAD+] activity
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0005975 IEA carbohydrate metabolic process
GO:0006072 IEA glycerol-3-phosphate metabolic process
GO:0006644 TAS phospholipid metabolic process
GO:0006654 TAS phosphatidic acid biosynthetic process
GO:0009331 IEA glycerol-3-phosphate dehydrogenase complex
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0019432 TAS triglyceride biosynthetic process
GO:0042803 IEA protein homodimerization activity
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046168 IEA glycerol-3-phosphate catabolic process
GO:0046474 TAS glycerophospholipid biosynthetic process
GO:0051287 IEA NAD binding
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162194 Gpd1-002 protein_coding Mus_musculus 0 1343
ENSMUST00000023760 Gpd1-001 protein_coding Mus_musculus 0 1037
ENSMUST00000161768 Gpd1-003 retained_intron Mus_musculus 0 477

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