C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 83
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167766 ZNF83 9606 - 19:52594060-52690581 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000301096 ZNF83-201 52612367-52690581 protein_coding
  ENST00000391789 ZNF83-202 52612367-52690581 protein_coding
  ENST00000536937 ZNF83-203 52612367-52638391 protein_coding
  ENST00000541777 ZNF83-004 52612378-52618040 protein_coding
  ENST00000544146 ZNF83-204 52612367-52690581 protein_coding
  ENST00000545872 ZNF83-002 52612378-52638385 protein_coding
  ENST00000594682 ZNF83-001 52612378-52690488 protein_coding
  ENST00000595171 ZNF83-010 52617292-52690496 processed_transcript
  ENST00000595939 ZNF83-005 52614618-52638350 nonsense_mediated_decay
  ENST00000596440 ZNF83-015 52618675-52690488 processed_transcript
  ENST00000596930 ZNF83-012 52614665-52638365 protein_coding
  ENST00000597161 ZNF83-011 52614672-52638355 protein_coding
  ENST00000597597 ZNF83-003 52612377-52637086 protein_coding
  ENST00000598190 ZNF83-014 52654865-52690474 retained_intron
  ENST00000598536 ZNF83-009 52614689-52690486 protein_coding
  ENST00000600457 ZNF83-013 52654071-52690496 processed_transcript
  ENST00000600714 ZNF83-017 52594060-52660844 protein_coding
  ENST00000601140 ZNF83-006 52614690-52638350 nonsense_mediated_decay
  ENST00000601237 ZNF83-008 52618500-52638388 retained_intron
  ENST00000601257 ZNF83-016 52594151-52690496 protein_coding
  ENST00000602232 ZNF83-007 52618712-52690496 retained_intron
  ENST00000610782 ZNF83-205 52612367-52690581 protein_coding
  ENST00000621972 ZNF83-206 52612367-52690581 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000301096ENST00000391789ENST00000536937ENST00000541777ENST00000544146ENST00000545872ENST00000594682ENST00000596440ENST00000597597ENST00000600457ENST00000602232ENST00000610782
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000301096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.067±0.00 N/A N/A N/A
ENST00000391789 N/A N/A N/A N/A N/A 1.370±0.00 0.652±0.00 2.421±0.00 N/A N/A N/A N/A 0.841±0.00 1.553±0.00
ENST00000536937 2.235±0.00 1.808±0.00 N/A 1.193±0.00 3.426±2.13 1.529±0.00 N/A 4.342±0.00 N/A N/A 0.175±0.00 3.602±0.43 1.784±0.06 0.968±0.00
ENST00000541777 1.523±0.00 3.429±0.00 0.777±0.00 1.888±0.06 4.011±0.00 1.375±0.02 0.637±0.19 1.300±1.18 2.144±1.81 2.615±0.00 0.120±0.00 4.245±2.56 1.200±0.28 4.607±3.08
ENST00000544146 N/A N/A 1.235±0.00 N/A N/A N/A 0.646±0.00 N/A N/A N/A N/A 2.556±0.00 1.220±0.00 N/A
ENST00000545872 N/A N/A N/A 0.901±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.020±0.00
ENST00000594682 N/A N/A N/A N/A 1.207±0.00 1.488±0.00 N/A N/A N/A N/A N/A 5.181±1.31 N/A N/A
ENST00000596440 N/A N/A N/A N/A N/A N/A N/A 1.337±0.00 N/A N/A N/A N/A N/A N/A
ENST00000597597 N/A 0.954±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.653±0.00 N/A N/A N/A
ENST00000602232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.464±0.00 N/A N/A N/A
ENST00000610782 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.533±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006L8 CIL_0006L8_0002 CGP 19:52555822-52690581
CIL_0006L8 CIL_0006L8_0003 CGP 19:52594060-52735073

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000002617 Zfp40 zinc finger protein 40 protein_coding Mus_musculus
ENSMUSG00000023882 Zfp54 zinc finger protein 54 protein_coding Mus_musculus
ENSMUSG00000057409 Zfp53 zinc finger protein 53 protein_coding Mus_musculus
ENSMUSG00000058186 Gm13242 predicted gene 13242 protein_coding Mus_musculus
ENSMUSG00000061544 Zfp229 zinc finger protein 229 protein_coding Mus_musculus
ENSMUSG00000062518 Zfp534 zinc finger protein 534 protein_coding Mus_musculus
ENSMUSG00000062743 Zfp677 zinc finger protein 677 protein_coding Mus_musculus
ENSMUSG00000066007 Zfp600 zinc finger protein 600 protein_coding Mus_musculus
ENSMUSG00000066009 Gm13051 predicted gene 13051 protein_coding Mus_musculus
ENSMUSG00000067919 Rex2 reduced expression 2 protein_coding Mus_musculus
ENSMUSG00000067928 Zfp760 zinc finger protein 760 protein_coding Mus_musculus
ENSMUSG00000067931 Zfp948 zinc finger protein 948 protein_coding Mus_musculus
ENSMUSG00000078498 Gm13151 predicted gene 13151 protein_coding Mus_musculus
ENSMUSG00000078503 Gm13225 predicted gene 13225 protein_coding Mus_musculus
ENSMUSG00000086147 Gm13150 predicted gene 13150 protein_coding Mus_musculus
ENSMUSG00000096433 Gm4944 predicted gene 4944 protein_coding Mus_musculus

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