C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: predicted gene 13225
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000078503 Gm13225 10090 + 4:145510759-145539188 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000105741 Gm13225-002 145514884-145539188 protein_coding
  ENSMUST00000105742 Gm13225-003 145510759-145539188 protein_coding
  ENSMUST00000128939 Gm13225-004 145510777-145511836 processed_transcript
  ENSMUST00000136309 Gm13225-001 145510791-145534919 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000105741ENSMUST00000105742ENSMUST00000136309
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000105741 N/A N/A 0.013±0.00 N/A N/A 0.393±0.00 N/A N/A 0.035±0.02 0.268±0.00 0.002±0.00 N/A 0.036±0.01 0.452±0.33
ENSMUST00000105742 0.336±0.05 0.132±0.00 0.009±0.00 0.048±0.04 0.419±0.23 0.208±0.00 0.135±0.01 0.085±0.07 0.036±0.03 0.041±0.01 0.007±0.00 0.048±0.06 0.988±1.51 0.548±0.42
ENSMUST00000136309 N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A 0.051±0.01 N/A 0.105±0.00 N/A N/A 0.057±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HA CIL_0004HA_0004 CGP 4:145510759-145625345

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000167554 ZNF610 zinc finger protein 610 protein_coding Homo_sapiens
ENSG00000167562 ZNF701 zinc finger protein 701 protein_coding Homo_sapiens
ENSG00000167766 ZNF83 zinc finger protein 83 protein_coding Homo_sapiens
ENSG00000170954 ZNF415 zinc finger protein 415 protein_coding Homo_sapiens
ENSG00000180257 ZNF816 zinc finger protein 816 protein_coding Homo_sapiens
ENSG00000182986 ZNF320 zinc finger protein 320 protein_coding Homo_sapiens
ENSG00000196214 ZNF766 zinc finger protein 766 protein_coding Homo_sapiens
ENSG00000196417 ZNF765 zinc finger protein 765 protein_coding Homo_sapiens
ENSG00000197385 ZNF860 zinc finger protein 860 protein_coding Homo_sapiens
ENSG00000197928 ZNF677 zinc finger protein 677 protein_coding Homo_sapiens
ENSG00000198346 ZNF813 zinc finger protein 813 protein_coding Homo_sapiens
ENSG00000198464 ZNF480 zinc finger protein 480 protein_coding Homo_sapiens
ENSG00000198538 ZNF28 zinc finger protein 28 protein_coding Homo_sapiens
ENSG00000198633 ZNF534 zinc finger protein 534 protein_coding Homo_sapiens
ENSG00000203326 ZNF525 zinc finger protein 525 protein_coding Homo_sapiens
ENSG00000204604 ZNF468 zinc finger protein 468 protein_coding Homo_sapiens
ENSG00000213020 ZNF611 zinc finger protein 611 protein_coding Homo_sapiens
ENSG00000221874 ZNF321P zinc finger protein 321, pseudogene protein_coding Homo_sapiens
ENSG00000221923 ZNF880 zinc finger protein 880 protein_coding Homo_sapiens
ENSG00000258405 ZNF578 zinc finger protein 578 protein_coding Homo_sapiens

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