C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 40
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002617 Zfp40 10090 - 17:23173869-23193252 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037057 Zfp40-001 23173869-23193252 protein_coding
  ENSMUST00000135840 Zfp40-005 23177285-23193251 processed_transcript
  ENSMUST00000140313 Zfp40-002 23174876-23178539 protein_coding
  ENSMUST00000142999 Zfp40-003 23173893-23193210 processed_transcript
  ENSMUST00000151447 Zfp40-004 23191346-23193252 protein_coding
  ENSMUST00000172177 Zfp40-201 23174876-23191379 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037057ENSMUST00000135840ENSMUST00000140313ENSMUST00000142999ENSMUST00000151447ENSMUST00000172177
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037057 0.633±0.29 0.184±0.12 0.895±0.32 2.507±1.16 0.531±0.24 0.270±0.12 0.273±0.07 0.329±0.17 0.251±0.13 0.514±0.10 0.190±0.01 0.614±0.35 0.419±0.17 0.222±0.00
ENSMUST00000135840 N/A 0.170±0.01 N/A N/A 0.396±0.00 0.232±0.00 N/A N/A N/A N/A N/A 0.557±0.19 N/A N/A
ENSMUST00000140313 N/A 0.457±0.00 N/A N/A 0.354±0.00 N/A N/A N/A 0.155±0.00 N/A N/A N/A 0.327±0.07 N/A
ENSMUST00000142999 N/A 0.351±0.26 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.466±0.10 N/A N/A
ENSMUST00000151447 N/A 0.149±0.00 N/A N/A N/A 0.574±0.34 0.544±0.00 N/A 0.260±0.00 0.643±0.00 N/A 0.456±0.13 N/A 0.244±0.00
ENSMUST00000172177 N/A N/A N/A 2.238±0.00 N/A 0.068±0.00 N/A N/A N/A N/A 0.231±0.00 0.841±0.21 0.835±0.08 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000167554 ZNF610 zinc finger protein 610 protein_coding Homo_sapiens
ENSG00000167562 ZNF701 zinc finger protein 701 protein_coding Homo_sapiens
ENSG00000167766 ZNF83 zinc finger protein 83 protein_coding Homo_sapiens
ENSG00000170954 ZNF415 zinc finger protein 415 protein_coding Homo_sapiens
ENSG00000180257 ZNF816 zinc finger protein 816 protein_coding Homo_sapiens
ENSG00000182986 ZNF320 zinc finger protein 320 protein_coding Homo_sapiens
ENSG00000196214 ZNF766 zinc finger protein 766 protein_coding Homo_sapiens
ENSG00000196417 ZNF765 zinc finger protein 765 protein_coding Homo_sapiens
ENSG00000197385 ZNF860 zinc finger protein 860 protein_coding Homo_sapiens
ENSG00000197928 ZNF677 zinc finger protein 677 protein_coding Homo_sapiens
ENSG00000198346 ZNF813 zinc finger protein 813 protein_coding Homo_sapiens
ENSG00000198464 ZNF480 zinc finger protein 480 protein_coding Homo_sapiens
ENSG00000198538 ZNF28 zinc finger protein 28 protein_coding Homo_sapiens
ENSG00000198633 ZNF534 zinc finger protein 534 protein_coding Homo_sapiens
ENSG00000203326 ZNF525 zinc finger protein 525 protein_coding Homo_sapiens
ENSG00000204604 ZNF468 zinc finger protein 468 protein_coding Homo_sapiens
ENSG00000213020 ZNF611 zinc finger protein 611 protein_coding Homo_sapiens
ENSG00000221874 ZNF321P zinc finger protein 321, pseudogene protein_coding Homo_sapiens
ENSG00000221923 ZNF880 zinc finger protein 880 protein_coding Homo_sapiens
ENSG00000258405 ZNF578 zinc finger protein 578 protein_coding Homo_sapiens

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