C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: immature colon carcinoma transcript 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000167862 ICT1 9606 + 17:75012670-75021261 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000301585 ICT1-001 75012674-75021261 protein_coding
  ENST00000580800 ICT1-002 75012737-75020575 nonsense_mediated_decay
  ENST00000583772 ICT1-003 75020229-75021261 retained_intron
  ENST00000584208 ICT1-004 75012670-75020939 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000301585ENST00000583772
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000301585 7.925±0.00 17.219±0.00 3.631±0.00 5.540±1.81 6.776±3.92 7.154±2.18 9.284±5.49 11.775±6.33 11.053±8.00 3.935±1.06 13.502±6.79 19.517±14.42 23.237±8.37 14.173±3.43
ENST00000583772 1.867±0.00 4.273±0.00 N/A 3.114±0.00 7.604±0.00 1.803±0.00 N/A N/A N/A 1.068±0.00 N/A N/A N/A 5.793±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00008O CIL_00008O_0001 CGP 17:74987632-75021261

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003747 IEA translation release factor activity
GO:0004045 IDA aminoacyl-tRNA hydrolase activity
GO:0005739 IDA mitochondrion
GO:0005762 IDA mitochondrial large ribosomal subunit
GO:0006415 IEA translational termination
GO:0016150 IDA translation release factor activity, codon nonspecific
GO:0070126 IDA mitochondrial translational termination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078835 ICT1 immature colon carcinoma transcript 1 protein_coding Danio_rerio
ENSMUSG00000018858 Ict1 immature colon carcinoma transcript 1 protein_coding Mus_musculus

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