C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, CCHC domain containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168228 ZCCHC4 9606 + 4:25312785-25370383 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000302874 ZCCHC4-001 25312786-25370383 protein_coding
  ENST00000505412 ZCCHC4-004 25333261-25370026 protein_coding
  ENST00000505451 ZCCHC4-002 25312785-25352541 processed_transcript
  ENST00000507760 ZCCHC4-003 25312795-25366115 nonsense_mediated_decay
  ENST00000508058 ZCCHC4-005 25361709-25365148 retained_intron
  ENST00000612982 ZCCHC4-201 25312818-25349685 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000302874ENST00000505412ENST00000505451ENST00000507760ENST00000508058ENST00000612982
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000302874 1.344±0.00 N/A 0.233±0.00 0.275±0.01 0.292±0.00 0.324±0.00 0.200±0.00 N/A 1.138±0.00 0.599±0.11 0.925±0.00 0.475±0.23 0.509±0.28 0.744±0.35
ENST00000505412 N/A 2.359±0.00 N/A 0.137±0.00 0.932±0.00 0.418±0.06 0.505±0.00 0.783±0.00 0.362±0.00 0.222±0.00 1.035±0.00 1.478±0.00 0.420±0.11 0.812±0.00
ENST00000505451 N/A N/A N/A N/A N/A 0.622±0.00 N/A N/A 0.188±0.00 N/A 0.180±0.00 N/A N/A 0.695±0.00
ENST00000507760 N/A 0.635±0.00 0.300±0.00 0.207±0.00 N/A 0.271±0.01 N/A 0.713±0.09 0.886±0.00 0.324±0.00 0.092±0.00 0.405±0.00 0.207±0.00 0.261±0.00
ENST00000508058 N/A N/A N/A N/A N/A 1.745±0.00 N/A N/A N/A 2.370±0.00 N/A N/A N/A N/A
ENST00000612982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.080±0.00 0.498±0.00 N/A 0.837±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002OW CIL_0002OW_0001 CGP 4:25160641-25370383
CIL_0002F9 CIL_0002F9_0001 CGP 4:25312785-25418498

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0008168 IEA methyltransferase activity
GO:0008270 IEA zinc ion binding
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018810 ZCCHC4 zinc finger, CCHC domain containing 4 protein_coding Danio_rerio
ENSMUSG00000029179 Zcchc4 zinc finger, CCHC domain containing 4 protein_coding Mus_musculus

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