C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, CCHC domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000507760 ZCCHC4-003 ENSG00000168228 9606 + 4:25312795-25366115 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000507760
Transcript ID Adrenal Bladder Brain Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000507760 0.635±0.00 0.300±0.00 0.207±0.00 0.271±0.01 0.713±0.09 0.886±0.00 0.324±0.00 0.092±0.00 0.405±0.00 0.207±0.00 0.261±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002OW CIL_0002OW_0001 CGP 4:25160641-25370383
CIL_0002F9 CIL_0002F9_0001 CGP 4:25312785-25418498

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0008168 IEA methyltransferase activity
GO:0008270 IEA zinc ion binding
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000157074 Zcchc4-004 retained_intron Mus_musculus 0 470
ENSMUST00000031077 Zcchc4-003 protein_coding Mus_musculus 0 460
ENSMUST00000113904 Zcchc4-001 protein_coding Mus_musculus 0 460

Loading