C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, CCHC domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000302874 ZCCHC4-001 ENSG00000168228 9606 + 4:25312786-25370383 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000302874
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000302874 1.344±0.00 0.233±0.00 0.275±0.01 0.292±0.00 0.324±0.00 0.200±0.00 1.138±0.00 0.599±0.11 0.925±0.00 0.475±0.23 0.509±0.28 0.744±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002OW CIL_0002OW_0001 CGP 4:25160641-25370383
CIL_0002F9 CIL_0002F9_0001 CGP 4:25312785-25418498

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0008168 IEA methyltransferase activity
GO:0008270 IEA zinc ion binding
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113904 Zcchc4-001 protein_coding Mus_musculus 0 1591
ENSMUST00000113901 Zcchc4-002 protein_coding Mus_musculus 0 1328
ENSMUST00000031077 Zcchc4-003 protein_coding Mus_musculus 0 1279
ENSMUST00000149612 Zcchc4-005 processed_transcript Mus_musculus 0 737
ENSMUST00000157074 Zcchc4-004 retained_intron Mus_musculus 0 466
ENSMUST00000143745 Zcchc4-006 retained_intron Mus_musculus 0 405

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