C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: septin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168385 SEPT2 9606 + 2:241315100-241354027 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000360051 SEPT2-001 241315289-241354024 protein_coding
  ENST00000366210 SEPT2-041 241324216-241337098 processed_transcript
  ENST00000391971 SEPT2-007 241315861-241354027 protein_coding
  ENST00000391973 SEPT2-002 241315100-241354024 protein_coding
  ENST00000401990 SEPT2-004 241315882-241352109 protein_coding
  ENST00000402092 SEPT2-008 241315928-241354027 protein_coding
  ENST00000407017 SEPT2-014 241315355-241336160 protein_coding
  ENST00000407971 SEPT2-005 241315883-241354027 protein_coding
  ENST00000411484 SEPT2-023 241315906-241337448 protein_coding
  ENST00000420786 SEPT2-037 241316170-241335151 protein_coding
  ENST00000421717 SEPT2-046 241337476-241352188 protein_coding
  ENST00000425899 SEPT2-033 241315946-241336070 nonsense_mediated_decay
  ENST00000428282 SEPT2-009 241315270-241343070 protein_coding
  ENST00000428524 SEPT2-013 241315355-241335146 protein_coding
  ENST00000429791 SEPT2-036 241316003-241326051 protein_coding
  ENST00000434955 SEPT2-026 241315921-241336073 protein_coding
  ENST00000436795 SEPT2-021 241315905-241337485 protein_coding
  ENST00000437066 SEPT2-034 241315953-241337433 protein_coding
  ENST00000441533 SEPT2-031 241315944-241335210 protein_coding
  ENST00000443492 SEPT2-040 241315951-241337679 protein_coding
  ENST00000445030 SEPT2-012 241315355-241335212 protein_coding
  ENST00000449239 SEPT2-039 241324154-241337716 protein_coding
  ENST00000451310 SEPT2-047 241350087-241352626 protein_coding
  ENST00000457335 SEPT2-022 241315901-241337495 nonsense_mediated_decay
  ENST00000457874 SEPT2-042 241335843-241337765 protein_coding
  ENST00000461048 SEPT2-006 241315894-241325244 processed_transcript
  ENST00000462147 SEPT2-025 241315913-241337790 processed_transcript
  ENST00000464128 SEPT2-030 241315944-241343809 processed_transcript
  ENST00000466211 SEPT2-027 241315924-241343026 processed_transcript
  ENST00000467971 SEPT2-032 241315946-241337557 retained_intron
  ENST00000469175 SEPT2-020 241315882-241337711 processed_transcript
  ENST00000469434 SEPT2-016 241315447-241337452 retained_intron
  ENST00000473479 SEPT2-029 241315936-241336336 retained_intron
  ENST00000475474 SEPT2-019 241315875-241336381 retained_intron
  ENST00000475823 SEPT2-038 241316483-241337447 processed_transcript
  ENST00000476841 SEPT2-043 241335946-241337532 retained_intron
  ENST00000481500 SEPT2-045 241337720-241346602 retained_intron
  ENST00000482304 SEPT2-018 241315864-241335599 retained_intron
  ENST00000484167 SEPT2-044 241337311-241343837 retained_intron
  ENST00000484648 SEPT2-035 241315959-241317538 processed_transcript
  ENST00000484740 SEPT2-028 241315935-241335640 retained_intron
  ENST00000492978 SEPT2-010 241315270-241337734 processed_transcript
  ENST00000494824 SEPT2-024 241315906-241342999 processed_transcript
  ENST00000495463 SEPT2-017 241315861-241336926 processed_transcript
  ENST00000616972 SEPT2-201 241315861-241354024 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000391971ENST00000402092ENST00000407971
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000391971 122.656±0.00 58.216±0.00 N/A 54.933±0.00 67.849±0.00 67.363±0.00 26.359±0.00 78.057±0.00 28.235±0.00 95.754±0.00 64.785±16.49 105.771±8.97 104.550±0.00
ENST00000402092 N/A N/A N/A 23.162±0.00 N/A N/A N/A N/A N/A 31.791±0.00 N/A N/A N/A
ENST00000407971 N/A 40.857±0.00 16.704±0.00 N/A 34.093±0.00 28.705±0.00 N/A 43.087±0.00 N/A N/A N/A N/A 105.474±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000473 CIL_000473_0001 CGP 2:241188509-241317061
CIL_0002JH CIL_0002JH_0001 CGP 2:241227264-241354027
CIL_0002JL CIL_0002JL_0001 CGP 2:241315100-241494841

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000145 IEA exocyst
GO:0000776 IEA kinetochore
GO:0002036 IEA regulation of L-glutamate transport
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005886 IEA plasma membrane
GO:0005938 ISS cell cortex
GO:0007049 IEA cell cycle
GO:0007067 IEA mitotic nuclear division
GO:0007224 ISS smoothened signaling pathway
GO:0007264 IEA small GTPase mediated signal transduction
GO:0009986 IEA cell surface
GO:0015629 IDA actin cytoskeleton
GO:0030234 IEA enzyme regulator activity
GO:0031105 IEA septin complex
GO:0031175 IEA neuron projection development
GO:0032880 IEA regulation of protein localization
GO:0032947 IEA protein complex scaffold
GO:0035869 IEA ciliary transition zone
GO:0042384 ISS cilium assembly
GO:0042995 IEA cell projection
GO:0045202 IEA synapse
GO:0048471 IEA perinuclear region of cytoplasm
GO:0050790 IEA regulation of catalytic activity
GO:0060170 ISS ciliary membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027590 sept2 septin 2 protein_coding Danio_rerio
ENSMUSG00000026276 Sept2 septin 2 protein_coding Mus_musculus

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