C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: septin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000391971 SEPT2-007 ENSG00000168385 9606 + 2:241315861-241354027 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000391971
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000391971 122.656±0.00 58.216±0.00 54.933±0.00 67.849±0.00 67.363±0.00 26.359±0.00 78.057±0.00 28.235±0.00 95.754±0.00 64.785±16.49 105.771±8.97 104.550±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000473 CIL_000473_0001 CGP 2:241188509-241317061
CIL_0002JH CIL_0002JH_0001 CGP 2:241227264-241354027
CIL_0002JL CIL_0002JL_0001 CGP 2:241315100-241494841

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005938 ISS cell cortex
GO:0007049 IEA cell cycle
GO:0007067 IEA mitotic nuclear division
GO:0007224 ISS smoothened signaling pathway
GO:0015629 IDA actin cytoskeleton
GO:0031105 IEA septin complex
GO:0042384 ISS cilium assembly
GO:0060170 ISS ciliary membrane
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000179353 Sept2-203 protein_coding Mus_musculus 0 1413
ENSMUST00000168776 Sept2-201 protein_coding Mus_musculus 0 1413
ENSMUST00000027495 Sept2-001 protein_coding Mus_musculus 0 1413
ENSMUST00000172165 Sept2-202 protein_coding Mus_musculus 0 1391
ENSMUST00000112912 Sept2-007 protein_coding Mus_musculus 0 843
ENSMUST00000150931 Sept2-009 protein_coding Mus_musculus 0 839
ENSMUST00000129211 Sept2-004 protein_coding Mus_musculus 0 802
ENSMUST00000131175 Sept2-006 protein_coding Mus_musculus 0 795
ENSMUST00000142401 Sept2-008 protein_coding Mus_musculus 0 531
ENSMUST00000136182 Sept2-002 protein_coding Mus_musculus 0 508
ENSMUST00000149532 Sept2-005 protein_coding Mus_musculus 0 451
ENSMUST00000152778 Sept2-010 retained_intron Mus_musculus 0 422
ENSMUST00000153826 Sept2-003 protein_coding Mus_musculus 0 326
ENSMUST00000152476 Sept2-011 retained_intron Mus_musculus 7.00649e-44 183
ENSMUST00000157021 Sept2-012 protein_coding Mus_musculus 2e-40 172

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