C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: component of oligomeric golgi complex 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168434 COG7 9606 - 16:23388493-23453180 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000307149 COG7-001 23388493-23453180 protein_coding
  ENST00000561854 COG7-003 23388776-23393318 nonsense_mediated_decay
  ENST00000563164 COG7-005 23391843-23393292 protein_coding
  ENST00000566364 COG7-006 23388641-23393581 retained_intron
  ENST00000567821 COG7-004 23398046-23417293 retained_intron
  ENST00000569635 COG7-007 23389870-23394946 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000307149ENST00000561854ENST00000567821ENST00000569635
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000307149 2.049±0.00 4.045±0.00 1.863±0.84 2.919±0.00 1.278±0.14 1.091±0.74 3.733±3.29 3.303±0.00 1.650±0.57 1.216±0.61 3.511±2.69 3.811±0.49 4.903±0.80
ENST00000561854 N/A N/A N/A N/A N/A N/A N/A N/A 4.040±0.00 N/A N/A N/A N/A
ENST00000567821 2.047±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.156±0.00
ENST00000569635 5.645±0.00 15.262±0.00 4.099±3.98 4.946±4.75 3.283±3.00 1.983±1.67 6.487±0.00 3.389±0.00 7.872±0.00 3.889±0.00 2.310±1.43 0.966±1.17 5.269±1.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006D6 CIL_0006D6_0001 CGP 16:23278231-23453180
CIL_0006D5 CIL_0006D5_0001 CGP 16:23388493-23521995

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005794 IDA Golgi apparatus
GO:0006486 IMP protein glycosylation
GO:0006886 IMP:IEA intracellular protein transport
GO:0006890 IMP retrograde vesicle-mediated transport, Golgi to ER
GO:0016020 IEA membrane
GO:0017119 IDA:IEA Golgi transport complex
GO:0033365 IMP protein localization to organelle
GO:0034067 IMP protein localization to Golgi apparatus
GO:0050821 IMP protein stabilization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061372 cog7 component of oligomeric golgi complex 7 protein_coding Danio_rerio
ENSMUSG00000034951 Cog7 component of oligomeric golgi complex 7 protein_coding Mus_musculus

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