C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006D5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168434-ENSG00000103365 CGP 9606 16:23388493-23521995
GeneTranscriptPositionBiotype
ENSG00000103365 (GGA2)
golgi-associated, gamma adaptin ear containing, ARF binding protein 2 		ENST00000309859 (GGA2-001) 23463542-23510494 protein_coding
ENST00000562117 (GGA2-009) 23493431-23510389 protein_coding
ENST00000562944 (GGA2-006) 23493423-23510448 protein_coding
ENST00000563047 (GGA2-018) 23493360-23510424 nonsense_mediated_decay
ENST00000563494 (GGA2-010) 23491685-23510492 nonsense_mediated_decay
ENST00000566547 (GGA2-004) 23495343-23510487 retained_intron
ENST00000566651 (GGA2-005) 23494112-23495778 retained_intron
ENST00000566685 (GGA2-016) 23466685-23467413 processed_transcript
ENST00000567201 (GGA2-017) 23486085-23494402 retained_intron
ENST00000567339 (GGA2-015) 23466590-23467535 processed_transcript
ENST00000567468 (GGA2-002) 23464323-23510424 protein_coding
ENST00000568799 (GGA2-007) 23491676-23510494 retained_intron
ENST00000568922 (GGA2-014) 23466591-23469582 retained_intron
ENST00000569182 (GGA2-013) 23474953-23480423 processed_transcript
ENST00000569189 (GGA2-008) 23491777-23510488 nonsense_mediated_decay
ENST00000569300 (GGA2-012) 23491745-23521995 protein_coding
ENST00000570111 (GGA2-011) 23488680-23510464 nonsense_mediated_decay
ENSG00000168434 (COG7)
component of oligomeric golgi complex 7 		ENST00000307149 (COG7-001) 23388493-23453180 protein_coding
ENST00000561854 (COG7-003) 23388776-23393318 nonsense_mediated_decay
ENST00000563164 (COG7-005) 23391843-23393292 protein_coding
ENST00000566364 (COG7-006) 23388641-23393581 retained_intron
ENST00000567821 (COG7-004) 23398046-23417293 retained_intron
ENST00000569635 (COG7-007) 23389870-23394946 processed_transcript
ENSG00000212593 (SNORA75)
Small nucleolar RNA SNORA75 		ENST00000391291 (SNORA75.1-206) 23441841-23441921 snoRNA
ENSG00000259782 (CTD-2270L9.2)
 ENST00000561624 (CTD-2270L9.2-001) 23446446-23447282 sense_intronic
ENSG00000261528 (AC002400.1)
 ENST00000569310 (AC002400.1-001) 23500905-23501630 processed_pseudogene
ENSG00000280039 (CTD-2270L9.3)
 ENST00000625159 (CTD-2270L9.3-001) 23412380-23416680 TEC
CIL_0006D5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034951-ENSMUSG00000030872 CGP 10090 7:121922839-122021222
GeneTranscriptPositionBiotype
ENSMUSG00000030872 (Gga2)
golgi associated, gamma adaptin ear containing, ARF binding protein 2 		ENSMUST00000033160 (Gga2-001) 121986722-122021222 protein_coding
ENSMUST00000124566 (Gga2-003) 121986722-122021167 nonsense_mediated_decay
ENSMUST00000131081 (Gga2-006) 122010423-122021187 retained_intron
ENSMUST00000138441 (Gga2-005) 121996596-121999049 retained_intron
ENSMUST00000144779 (Gga2-004) 121988765-122002491 retained_intron
ENSMUST00000145277 (Gga2-002) 122004747-122021180 retained_intron
ENSMUSG00000034951 (Cog7)
component of oligomeric golgi complex 7 		ENSMUST00000057576 (Cog7-001) 121922839-121981711 protein_coding
ENSMUST00000148634 (Cog7-002) 121928910-121981694 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006D5_0001ENSG00000103365ENST00000309859ENST00000562117ENST00000562944ENST00000563047ENST00000563494ENST00000566547ENST00000566651ENST00000566685ENST00000567201ENST00000567339ENST00000567468ENST00000568799ENST00000568922ENST00000569182ENST00000569189ENST00000569300ENST00000570111ENSG00000168434ENST00000307149ENST00000561854ENST00000563164ENST00000566364ENST00000567821ENST00000569635ENSG00000212593ENST00000391291ENSG00000259782ENST00000561624ENSG00000261528ENST00000569310ENSG00000280039ENST00000625159CIL_0006D5_0002ENSMUSG00000030872ENSMUST00000033160ENSMUST00000124566ENSMUST00000131081ENSMUST00000138441ENSMUST00000144779ENSMUST00000145277ENSMUSG00000034951ENSMUST00000057576ENSMUST00000148634
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006D5_0001ENSG00000103365ENST00000309859ENST00000567201ENST00000568799ENST00000568922ENSG00000168434ENST00000307149ENST00000561854ENST00000567821ENST00000569635ENSG00000212593ENST00000391291ENSG00000259782ENST00000561624ENSG00000261528ENST00000569310ENSG00000280039ENST00000625159CIL_0006D5_0002ENSMUSG00000030872ENSMUST00000033160ENSMUST00000124566ENSMUST00000131081ENSMUST00000144779ENSMUSG00000034951ENSMUST00000057576
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103365 ENST00000309859 3.283±0.00 13.067±0.00 N/A 3.001±1.75 4.928±2.57 3.958±1.91 3.323±2.58 6.311±5.08 2.031±1.50 7.017±0.00 5.359±5.18 7.689±4.34 8.653±2.08 7.059±2.16
ENST00000562117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567201 N/A N/A 9.224±0.00 N/A N/A 5.800±0.00 2.182±0.00 4.883±0.00 5.250±0.00 10.929±0.00 1.165±0.00 N/A N/A N/A
ENST00000567339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568799 N/A N/A N/A 2.036±0.00 6.709±0.00 3.088±0.00 N/A N/A N/A 3.588±0.00 N/A 2.589±0.00 N/A N/A
ENST00000568922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.607±0.00 N/A N/A
ENST00000569182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569300 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168434 ENST00000307149 2.049±0.00 4.045±0.00 N/A 1.863±0.84 2.919±0.00 1.278±0.14 1.091±0.74 3.733±3.29 3.303±0.00 1.650±0.57 1.216±0.61 3.511±2.69 3.811±0.49 4.903±0.80
ENST00000561854 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.040±0.00 N/A N/A N/A N/A
ENST00000563164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567821 2.047±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.156±0.00
ENST00000569635 5.645±0.00 15.262±0.00 N/A 4.099±3.98 4.946±4.75 3.283±3.00 1.983±1.67 6.487±0.00 3.389±0.00 7.872±0.00 3.889±0.00 2.310±1.43 0.966±1.17 5.269±1.69
ENSG00000212593 ENST00000391291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.267±0.00
ENSG00000259782 ENST00000561624 0.085±0.00 0.456±0.00 0.067±0.00 0.149±0.00 0.067±0.00 0.078±0.00 0.083±0.00 0.380±0.00 0.069±0.00 0.139±0.00 0.015±0.00 0.224±0.20 0.078±0.00 0.345±0.12
ENSG00000261528 ENST00000569310 0.177±0.00 0.389±0.00 0.938±0.00 0.773±0.43 1.435±1.39 0.741±0.00 0.106±0.06 N/A 0.780±0.00 N/A N/A 0.050±0.01 0.070±0.00 0.219±0.00
ENSG00000280039 ENST00000625159 0.340±0.00 1.108±0.00 N/A 0.724±0.00 0.587±0.00 0.290±0.05 0.186±0.06 0.082±0.00 0.257±0.00 0.495±0.00 0.230±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030872 ENSMUST00000033160 N/A 1.062±0.00 3.050±0.25 3.250±1.30 N/A 0.829±0.13 N/A N/A 1.526±0.78 0.826±0.00 0.928±0.34 2.117±0.81 N/A 0.402±0.12
ENSMUST00000124566 3.120±0.63 0.948±0.00 7.009±0.30 2.476±1.53 2.773±0.39 0.852±0.18 1.928±0.06 3.214±0.77 2.846±2.25 1.853±0.38 1.140±0.42 4.353±0.50 16.878±7.39 0.687±0.21
ENSMUST00000131081 15.419±0.00 16.642±4.23 N/A N/A 29.113±2.40 5.546±1.59 N/A 11.507±0.00 3.501±0.27 10.326±1.42 N/A 41.843±9.93 N/A N/A
ENSMUST00000138441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144779 19.372±7.20 7.399±0.88 18.359±0.87 13.935±8.89 19.809±5.46 4.478±0.53 6.540±1.40 12.777±3.53 9.043±5.98 7.568±2.48 3.709±0.71 17.949±6.40 45.812±31.45 2.467±0.80
ENSMUST00000145277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000034951 ENSMUST00000057576 12.320±0.74 17.405±1.34 9.470±0.59 6.371±3.33 10.510±2.89 13.620±1.40 5.054±1.47 13.406±0.92 7.262±1.69 10.905±0.83 2.464±1.25 12.520±1.06 8.264±1.65 19.026±3.53
ENSMUST00000148634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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