C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: component of oligomeric golgi complex 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000307149 COG7-001 ENSG00000168434 9606 - 16:23388493-23453180 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000307149
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000307149 2.049±0.00 4.045±0.00 1.863±0.84 2.919±0.00 1.278±0.14 1.091±0.74 3.733±3.29 3.303±0.00 1.650±0.57 1.216±0.61 3.511±2.69 3.811±0.49 4.903±0.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006D6 CIL_0006D6_0001 CGP 16:23278231-23453180
CIL_0006D5 CIL_0006D5_0001 CGP 16:23388493-23521995

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005794 IDA Golgi apparatus
GO:0006486 IMP protein glycosylation
GO:0006886 IMP:IEA intracellular protein transport
GO:0006890 IMP retrograde vesicle-mediated transport, Golgi to ER
GO:0016020 IEA membrane
GO:0017119 IDA:IEA Golgi transport complex
GO:0033365 IMP protein localization to organelle
GO:0034067 IMP protein localization to Golgi apparatus
GO:0050821 IMP protein stabilization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057576 Cog7-001 protein_coding Mus_musculus 0 2760
ENSMUST00000148634 Cog7-002 retained_intron Mus_musculus 0 2161

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