C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006D6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168447-ENSG00000168434 CGP 9606 16:23278231-23453180
GeneTranscriptPositionBiotype
ENSG00000168434 (COG7)
component of oligomeric golgi complex 7 		ENST00000307149 (COG7-001) 23388493-23453180 protein_coding
ENST00000561854 (COG7-003) 23388776-23393318 nonsense_mediated_decay
ENST00000563164 (COG7-005) 23391843-23393292 protein_coding
ENST00000566364 (COG7-006) 23388641-23393581 retained_intron
ENST00000567821 (COG7-004) 23398046-23417293 retained_intron
ENST00000569635 (COG7-007) 23389870-23394946 processed_transcript
ENSG00000168447 (SCNN1B)
sodium channel, non-voltage-gated 1, beta subunit 		ENST00000307331 (SCNN1B-002) 23303973-23380801 protein_coding
ENST00000343070 (SCNN1B-001) 23302270-23381299 protein_coding
ENST00000564275 (SCNN1B-005) 23348592-23380803 nonsense_mediated_decay
ENST00000566441 (SCNN1B-004) 23355417-23372183 protein_coding
ENST00000566647 (SCNN1B-003) 23358202-23359379 processed_transcript
ENST00000566870 (SCNN1B-009) 23348795-23353244 retained_intron
ENST00000568085 (SCNN1B-006) 23348592-23380803 protein_coding
ENST00000568923 (SCNN1B-007) 23348592-23380803 protein_coding
ENST00000569789 (SCNN1B-008) 23278231-23352913 processed_transcript
ENSG00000212593 (SNORA75)
Small nucleolar RNA SNORA75 		ENST00000391291 (SNORA75.1-206) 23441841-23441921 snoRNA
ENSG00000259782 (CTD-2270L9.2)
 ENST00000561624 (CTD-2270L9.2-001) 23446446-23447282 sense_intronic
ENSG00000280039 (CTD-2270L9.3)
 ENST00000625159 (CTD-2270L9.3-001) 23412380-23416680 TEC
CIL_0006D6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030873-ENSMUSG00000034951 CGP 10090 7:121865111-121981711
GeneTranscriptPositionBiotype
ENSMUSG00000030873 (Scnn1b)
sodium channel, nonvoltage-gated 1 beta 		ENSMUST00000033161 (Scnn1b-201) 121865111-121918515 protein_coding
ENSMUSG00000034951 (Cog7)
component of oligomeric golgi complex 7 		ENSMUST00000057576 (Cog7-001) 121922839-121981711 protein_coding
ENSMUST00000148634 (Cog7-002) 121928910-121981694 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006D6_0001ENSG00000168434ENST00000307149ENST00000561854ENST00000563164ENST00000566364ENST00000567821ENST00000569635ENSG00000168447ENST00000307331ENST00000343070ENST00000564275ENST00000566441ENST00000566647ENST00000566870ENST00000568085ENST00000568923ENST00000569789ENSG00000212593ENST00000391291ENSG00000259782ENST00000561624ENSG00000280039ENST00000625159CIL_0006D6_0002ENSMUSG00000030873ENSMUST00000033161ENSMUSG00000034951ENSMUST00000057576ENSMUST00000148634
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006D6_0001ENSG00000168434ENST00000307149ENST00000561854ENST00000567821ENST00000569635ENSG00000168447ENST00000307331ENST00000343070ENST00000564275ENST00000566441ENST00000566647ENST00000566870ENST00000568085ENST00000568923ENSG00000212593ENST00000391291ENSG00000259782ENST00000561624ENSG00000280039ENST00000625159CIL_0006D6_0002ENSMUSG00000030873ENSMUST00000033161ENSMUSG00000034951ENSMUST00000057576
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000168434 ENST00000307149 2.049±0.00 4.045±0.00 N/A 1.863±0.84 2.919±0.00 1.278±0.14 1.091±0.74 3.733±3.29 3.303±0.00 1.650±0.57 1.216±0.61 3.511±2.69 3.811±0.49 4.903±0.80
ENST00000561854 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.040±0.00 N/A N/A N/A N/A
ENST00000563164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567821 2.047±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.156±0.00
ENST00000569635 5.645±0.00 15.262±0.00 N/A 4.099±3.98 4.946±4.75 3.283±3.00 1.983±1.67 6.487±0.00 3.389±0.00 7.872±0.00 3.889±0.00 2.310±1.43 0.966±1.17 5.269±1.69
ENSG00000168447 ENST00000307331 N/A N/A 1.321±0.00 N/A N/A N/A 0.122±0.00 N/A 0.822±0.00 0.336±0.00 N/A N/A N/A N/A
ENST00000343070 59.498±0.00 2.967±0.00 N/A N/A 1.769±0.00 4.557±3.32 N/A 13.343±0.00 0.056±0.00 20.685±0.00 1.843±0.00 1.077±0.49 7.181±4.81 0.535±0.35
ENST00000564275 N/A N/A N/A N/A N/A N/A 0.123±0.00 N/A N/A N/A N/A N/A N/A 0.071±0.00
ENST00000566441 N/A N/A N/A 0.125±0.00 N/A N/A 0.057±0.00 N/A N/A N/A N/A 0.440±0.00 N/A N/A
ENST00000566647 0.058±0.00 N/A N/A N/A N/A 0.353±0.00 N/A 0.087±0.00 N/A N/A N/A N/A N/A N/A
ENST00000566870 N/A N/A N/A 0.035±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568085 N/A N/A N/A N/A 0.175±0.00 1.527±0.00 N/A N/A N/A 0.906±0.00 N/A N/A N/A N/A
ENST00000568923 N/A N/A N/A N/A N/A N/A 0.104±0.00 N/A N/A 1.723±0.00 N/A N/A N/A N/A
ENST00000569789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000212593 ENST00000391291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.267±0.00
ENSG00000259782 ENST00000561624 0.085±0.00 0.456±0.00 0.067±0.00 0.149±0.00 0.067±0.00 0.078±0.00 0.083±0.00 0.380±0.00 0.069±0.00 0.139±0.00 0.015±0.00 0.224±0.20 0.078±0.00 0.345±0.12
ENSG00000280039 ENST00000625159 0.340±0.00 1.108±0.00 N/A 0.724±0.00 0.587±0.00 0.290±0.05 0.186±0.06 0.082±0.00 0.257±0.00 0.495±0.00 0.230±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030873 ENSMUST00000033161 1.416±1.18 0.250±0.06 5.190±0.20 0.059±0.01 2.381±0.52 9.222±3.50 0.039±0.01 28.421±5.89 0.023±0.02 61.820±10.33 0.060±0.02 0.982±0.70 10.923±3.33 0.127±0.07
ENSMUSG00000034951 ENSMUST00000057576 12.320±0.74 17.405±1.34 9.470±0.59 6.371±3.33 10.510±2.89 13.620±1.40 5.054±1.47 13.406±0.92 7.262±1.69 10.905±0.83 2.464±1.25 12.520±1.06 8.264±1.65 19.026±3.53
ENSMUST00000148634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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