C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: bone morphogenetic protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168487 BMP1 9606 + 8:22164736-22212326 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000306349 BMP1-010 22165252-22201482 protein_coding
  ENST00000306385 BMP1-001 22164736-22212326 protein_coding
  ENST00000354870 BMP1-201 22165140-22212324 protein_coding
  ENST00000397814 BMP1-202 22165140-22176942 protein_coding
  ENST00000471755 BMP1-003 22165400-22201200 nonsense_mediated_decay
  ENST00000483364 BMP1-002 22165400-22201200 nonsense_mediated_decay
  ENST00000517324 BMP1-016 22194215-22195587 retained_intron
  ENST00000518656 BMP1-004 22165335-22177906 nonsense_mediated_decay
  ENST00000518913 BMP1-015 22165252-22201482 nonsense_mediated_decay
  ENST00000520626 BMP1-006 22165324-22211892 nonsense_mediated_decay
  ENST00000520970 BMP1-009 22165187-22212324 nonsense_mediated_decay
  ENST00000520982 BMP1-005 22165324-22211892 nonsense_mediated_decay
  ENST00000521385 BMP1-007 22165400-22201200 nonsense_mediated_decay
  ENST00000521521 BMP1-012 22170159-22176596 processed_transcript
  ENST00000522332 BMP1-008 22198416-22201482 retained_intron
  ENST00000523457 BMP1-011 22179697-22192334 retained_intron
  ENST00000523749 BMP1-017 22192090-22194506 processed_transcript
  ENST00000523849 BMP1-013 22170697-22176998 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306349ENST00000306385ENST00000354870ENST00000397814ENST00000471755ENST00000483364ENST00000518656ENST00000520626ENST00000520970ENST00000520982ENST00000522332
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.374±0.00 N/A 14.674±5.46 0.644±0.00
ENST00000306385 3.015±0.00 N/A N/A 1.173±0.00 4.848±0.00 N/A 0.733±0.00 2.210±0.00 3.963±0.00 0.738±0.00 N/A 6.760±1.25 18.871±8.71 1.134±0.00
ENST00000354870 N/A N/A N/A N/A 0.220±0.00 N/A N/A N/A N/A 0.490±0.00 0.530±0.00 N/A N/A N/A
ENST00000397814 N/A N/A 0.366±0.00 0.203±0.00 1.838±0.00 N/A 0.430±0.00 3.959±0.00 N/A N/A N/A 2.738±0.00 N/A N/A
ENST00000471755 N/A N/A 0.104±0.00 0.125±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483364 N/A N/A N/A 0.177±0.00 N/A N/A N/A N/A N/A 0.757±0.00 N/A N/A N/A N/A
ENST00000518656 N/A N/A 0.833±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520626 N/A N/A N/A N/A 1.500±0.00 1.121±0.00 0.227±0.00 N/A N/A N/A 0.567±0.00 2.986±1.90 N/A N/A
ENST00000520970 2.096±0.00 2.276±0.00 N/A 0.088±0.00 1.406±0.00 1.042±0.77 0.450±0.00 2.110±0.00 1.778±0.00 2.047±0.00 N/A 5.439±0.67 9.888±4.13 3.106±0.00
ENST00000520982 4.205±0.00 2.150±0.00 0.231±0.00 N/A 0.535±0.00 1.890±0.83 0.580±0.50 2.324±0.00 1.313±0.00 0.872±0.00 0.530±0.00 2.887±2.12 14.441±1.40 1.772±0.06
ENST00000522332 N/A N/A 0.370±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000810 CIL_000810_0001 VISTA 8:21687877-22288944
CIL_0008ZI CIL_0008ZI_0001 VISTA 8:21743578-22344815
CIL_000812 CIL_000812_0001 VISTA 8:21749915-22350771

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001501 NAS skeletal system development
GO:0001502 TAS cartilage condensation
GO:0001503 IEA ossification
GO:0004222 TAS:IEA metalloendopeptidase activity
GO:0005125 IEA cytokine activity
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005576 TAS extracellular region
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IEA extracellular space
GO:0005794 IEA Golgi apparatus
GO:0006508 IDA:IEA proteolysis
GO:0007275 TAS multicellular organismal development
GO:0008083 IEA growth factor activity
GO:0008233 IDA peptidase activity
GO:0008237 NAS:IEA metallopeptidase activity
GO:0008270 IEA zinc ion binding
GO:0022617 TAS extracellular matrix disassembly
GO:0030154 IEA cell differentiation
GO:0030198 TAS extracellular matrix organization
GO:0031988 IEA membrane-bounded vesicle
GO:0042157 TAS lipoprotein metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0061036 IDA positive regulation of cartilage development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028071 bmp1a bone morphogenetic protein 1a protein_coding Danio_rerio
ENSMUSG00000022098 Bmp1 bone morphogenetic protein 1 protein_coding Mus_musculus

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