C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bone morphogenetic protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000520982 BMP1-005 ENSG00000168487 9606 + 8:22165324-22211892 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000520982
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000520982 4.205±0.00 2.150±0.00 0.231±0.00 0.535±0.00 1.890±0.83 0.580±0.50 2.324±0.00 1.313±0.00 0.872±0.00 0.530±0.00 2.887±2.12 14.441±1.40 1.772±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000810 CIL_000810_0001 VISTA 8:21687877-22288944
CIL_0008ZI CIL_0008ZI_0001 VISTA 8:21743578-22344815
CIL_000812 CIL_000812_0001 VISTA 8:21749915-22350771

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0006508 IEA proteolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022693 Bmp1-201 protein_coding Mus_musculus 0 3164
ENSDART00000127875 bmp1a-201 protein_coding Danio_rerio 0 1384
ENSDART00000059795 bmp1b-201 protein_coding Danio_rerio 0 909
ENSDART00000054472 tll1-001 protein_coding Danio_rerio 0 850
ENSMUST00000169941 Tll2-202 protein_coding Mus_musculus 7e-29 134
ENSMUST00000025986 Tll2-201 protein_coding Mus_musculus 7e-29 134

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