C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 208
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000168701 TMEM208 9606 + 16:67227103-67229278 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000304800 TMEM208-001 67227113-67229278 protein_coding
  ENST00000561586 TMEM208-006 67227145-67228956 retained_intron
  ENST00000562235 TMEM208-002 67227157-67229278 nonsense_mediated_decay
  ENST00000563168 TMEM208-003 67227113-67229248 retained_intron
  ENST00000563271 TMEM208-009 67228526-67229278 retained_intron
  ENST00000563426 TMEM208-008 67228518-67229278 processed_transcript
  ENST00000563953 TMEM208-007 67227120-67229262 protein_coding
  ENST00000564087 TMEM208-012 67227213-67228622 nonsense_mediated_decay
  ENST00000564649 TMEM208-010 67228671-67229278 retained_intron
  ENST00000565201 TMEM208-011 67227168-67229278 protein_coding
  ENST00000566486 TMEM208-004 67227118-67228302 retained_intron
  ENST00000567193 TMEM208-005 67227103-67229225 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000304800ENST00000562235ENST00000563426ENST00000564087ENST00000565201ENST00000567193
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000304800 17.150±0.00 33.013±0.00 1.069±0.00 11.444±0.85 11.863±9.52 11.201±4.44 2.552±1.79 22.600±5.34 23.060±20.83 9.301±5.79 8.769±0.00 18.305±9.67 40.371±11.17 17.726±1.96
ENST00000562235 N/A N/A N/A 3.207±0.00 1.442±0.00 N/A N/A N/A N/A 5.980±0.00 N/A N/A N/A N/A
ENST00000563426 N/A N/A N/A 3.440±0.00 N/A N/A N/A 14.031±0.00 N/A N/A N/A N/A N/A 10.063±0.00
ENST00000564087 N/A N/A N/A N/A 1.464±0.00 N/A N/A N/A 0.816±0.00 N/A N/A N/A N/A N/A
ENST00000565201 N/A N/A N/A N/A N/A N/A 0.654±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000567193 N/A N/A 3.145±0.00 3.422±0.00 1.179±0.00 1.582±0.00 0.931±0.00 N/A N/A 2.214±0.00 3.196±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005K1 CIL_0005K1_0001 CGP 16:67207139-67229278
CIL_0005K2 CIL_0005K2_0001 CGP 16:67227103-67247658

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0006914 IEA autophagy
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068291 TMEM208 transmembrane protein 208 protein_coding Danio_rerio
ENSMUSG00000014856 Tmem208 transmembrane protein 208 protein_coding Mus_musculus

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