C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transmembrane protein 208
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000562235 TMEM208-002 ENSG00000168701 9606 + 16:67227157-67229278 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLungENST00000562235
Transcript ID Brain Breast Lung
ENST00000562235 3.207±0.00 1.442±0.00 5.980±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005K1 CIL_0005K1_0001 CGP 16:67207139-67229278
CIL_0005K2 CIL_0005K2_0001 CGP 16:67227103-67247658

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0006914 IEA autophagy
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000153146 Tmem208-002 nonsense_mediated_decay Mus_musculus 0 785
ENSMUST00000015000 Tmem208-001 protein_coding Mus_musculus 0 628
ENSMUST00000126705 Tmem208-004 nonsense_mediated_decay Mus_musculus 0 448
ENSMUST00000098453 Tmem208-003 protein_coding Mus_musculus 0 411
ENSMUST00000109372 Tmem208-005 nonsense_mediated_decay Mus_musculus 0 399

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