C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 208
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000304800 TMEM208-001 ENSG00000168701 9606 + 16:67227113-67229278 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000304800
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000304800 17.150±0.00 33.013±0.00 1.069±0.00 11.444±0.85 11.863±9.52 11.201±4.44 2.552±1.79 22.600±5.34 23.060±20.83 9.301±5.79 8.769±0.00 18.305±9.67 40.371±11.17 17.726±1.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005K1 CIL_0005K1_0001 CGP 16:67207139-67229278
CIL_0005K2 CIL_0005K2_0001 CGP 16:67227103-67247658

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0006914 IEA autophagy
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015000 Tmem208-001 protein_coding Mus_musculus 0 789
ENSMUST00000153146 Tmem208-002 nonsense_mediated_decay Mus_musculus 0 669
ENSMUST00000126705 Tmem208-004 nonsense_mediated_decay Mus_musculus 0 433
ENSMUST00000098453 Tmem208-003 protein_coding Mus_musculus 0 425
ENSMUST00000109372 Tmem208-005 nonsense_mediated_decay Mus_musculus 0 401

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