C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: exportin 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169180 XPO6 9606 - 16:28097979-28211920 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000304658 XPO6-001 28097995-28211869 protein_coding
  ENST00000561488 XPO6-016 28155597-28156332 processed_transcript
  ENST00000562408 XPO6-009 28117037-28132363 retained_intron
  ENST00000563138 XPO6-012 28125769-28146303 retained_intron
  ENST00000564337 XPO6-015 28132398-28155975 processed_transcript
  ENST00000564905 XPO6-010 28107588-28133925 nonsense_mediated_decay
  ENST00000565284 XPO6-014 28125829-28152918 retained_intron
  ENST00000565698 XPO6-002 28097979-28211550 protein_coding
  ENST00000566073 XPO6-020 28180941-28211920 protein_coding
  ENST00000566175 XPO6-017 28146162-28156117 nonsense_mediated_decay
  ENST00000567038 XPO6-005 28101270-28101986 retained_intron
  ENST00000567842 XPO6-011 28125832-28146249 retained_intron
  ENST00000568065 XPO6-007 28097995-28101933 protein_coding
  ENST00000569216 XPO6-008 28107529-28112958 processed_transcript
  ENST00000569315 XPO6-006 28101055-28101915 protein_coding
  ENST00000569951 XPO6-021 28176058-28211476 protein_coding
  ENST00000569973 XPO6-018 28156133-28165419 processed_transcript
  ENST00000570007 XPO6-004 28105689-28106422 retained_intron
  ENST00000570033 XPO6-019 28169845-28181122 protein_coding
  ENST00000570294 XPO6-013 28146091-28153209 retained_intron
  ENST00000573275 XPO6-023 28106112-28111890 protein_coding
  ENST00000573645 XPO6-022 28156315-28173122 processed_transcript
  ENST00000574435 XPO6-024 28146172-28169901 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000304658ENST00000563138ENST00000568065
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000304658 9.325±0.00 7.225±0.00 0.974±0.00 8.806±3.00 5.638±0.74 5.734±0.63 1.993±0.94 5.655±2.80 2.278±0.74 5.573±1.22 2.469±0.00 7.905±3.15 9.438±0.41 23.876±12.67
ENST00000563138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.374±0.00 14.619±0.00 61.203±0.00
ENST00000568065 N/A N/A N/A N/A N/A N/A N/A N/A 7.053±0.00 14.420±0.00 N/A 15.503±0.00 12.851±1.27 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TQ CIL_0005TQ_0001 CGP 16:27787535-28211920
CIL_0005TT CIL_0005TT_0001 CGP 16:28097979-28323849

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005634 IEA:IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006611 IDA protein export from nucleus
GO:0006886 IEA intracellular protein transport
GO:0008536 IEA Ran GTPase binding
GO:0008565 IDA protein transporter activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041217 xpo6 exportin 6 protein_coding Danio_rerio
ENSMUSG00000000131 Xpo6 exportin 6 protein_coding Mus_musculus

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