C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005TT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169180-ENSG00000188322 CGP 9606 16:28097979-28323849
GeneTranscriptPositionBiotype
ENSG00000169180 (XPO6)
exportin 6 		ENST00000304658 (XPO6-001) 28097995-28211869 protein_coding
ENST00000561488 (XPO6-016) 28155597-28156332 processed_transcript
ENST00000562408 (XPO6-009) 28117037-28132363 retained_intron
ENST00000563138 (XPO6-012) 28125769-28146303 retained_intron
ENST00000564337 (XPO6-015) 28132398-28155975 processed_transcript
ENST00000564905 (XPO6-010) 28107588-28133925 nonsense_mediated_decay
ENST00000565284 (XPO6-014) 28125829-28152918 retained_intron
ENST00000565698 (XPO6-002) 28097979-28211550 protein_coding
ENST00000566073 (XPO6-020) 28180941-28211920 protein_coding
ENST00000566175 (XPO6-017) 28146162-28156117 nonsense_mediated_decay
ENST00000567038 (XPO6-005) 28101270-28101986 retained_intron
ENST00000567842 (XPO6-011) 28125832-28146249 retained_intron
ENST00000568065 (XPO6-007) 28097995-28101933 protein_coding
ENST00000569216 (XPO6-008) 28107529-28112958 processed_transcript
ENST00000569315 (XPO6-006) 28101055-28101915 protein_coding
ENST00000569951 (XPO6-021) 28176058-28211476 protein_coding
ENST00000569973 (XPO6-018) 28156133-28165419 processed_transcript
ENST00000570007 (XPO6-004) 28105689-28106422 retained_intron
ENST00000570033 (XPO6-019) 28169845-28181122 protein_coding
ENST00000570294 (XPO6-013) 28146091-28153209 retained_intron
ENST00000573275 (XPO6-023) 28106112-28111890 protein_coding
ENST00000573645 (XPO6-022) 28156315-28173122 processed_transcript
ENST00000574435 (XPO6-024) 28146172-28169901 protein_coding
ENSG00000188322 (SBK1)
SH3 domain binding kinase 1 		ENST00000341901 (SBK1-001) 28292519-28323849 protein_coding
ENSG00000200138 (RNY1P10)
RNA, Ro-associated Y1 pseudogene 10 		ENST00000363268 (RNY1P10-201) 28183318-28183430 misc_RNA
ENSG00000200652 (SNORA25)
Small nucleolar RNA SNORA25 		ENST00000363782 (SNORA25.1-205) 28179098-28179223 snoRNA
ENSG00000246465 (RP11-57A19.2)
 ENST00000501520 (RP11-57A19.2-001) 28284885-28292064 lincRNA
ENSG00000250982 (RP11-159J3.1)
 ENST00000513369 (RP11-159J3.1-001) 28239693-28240668 processed_pseudogene
ENSG00000260452 (TPRKBP2)
TP53RK binding protein pseudogene 2 		ENST00000565969 (TPRKBP2-001) 28111173-28111647 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0005TT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000000131-ENSMUSG00000042978 CGP 10090 7:126101715-126294999
GeneTranscriptPositionBiotype
ENSMUSG00000000131 (Xpo6)
exportin 6 		ENSMUST00000009344 (Xpo6-001) 126101716-126200408 protein_coding
ENSMUST00000163959 (Xpo6-007) 126169268-126200413 protein_coding
ENSMUST00000164741 (Xpo6-016) 126140643-126161012 protein_coding
ENSMUST00000165608 (Xpo6-014) 126104757-126112893 nonsense_mediated_decay
ENSMUST00000165660 (Xpo6-009) 126108521-126112825 protein_coding
ENSMUST00000166368 (Xpo6-015) 126169268-126181637 processed_transcript
ENSMUST00000166538 (Xpo6-018) 126112899-126140662 nonsense_mediated_decay
ENSMUST00000166540 (Xpo6-017) 126128227-126153035 nonsense_mediated_decay
ENSMUST00000166719 (Xpo6-012) 126101721-126104808 nonsense_mediated_decay
ENSMUST00000167147 (Xpo6-013) 126161008-126199928 nonsense_mediated_decay
ENSMUST00000167268 (Xpo6-019) 126118471-126200422 retained_intron
ENSMUST00000167315 (Xpo6-004) 126101721-126110051 retained_intron
ENSMUST00000168189 (Xpo6-002) 126101715-126200501 protein_coding
ENSMUST00000168564 (Xpo6-011) 126102346-126107129 nonsense_mediated_decay
ENSMUST00000168649 (Xpo6-008) 126149296-126161020 processed_transcript
ENSMUST00000168933 (Xpo6-010) 126102069-126105021 retained_intron
ENSMUST00000169059 (Xpo6-006) 126151688-126200342 processed_transcript
ENSMUST00000170675 (Xpo6-003) 126101721-126160871 processed_transcript
ENSMUST00000171861 (Xpo6-005) 126101734-126107166 nonsense_mediated_decay
ENSMUSG00000042978 (Sbk1)
SH3-binding kinase 1 		ENSMUST00000056028 (Sbk1-201) 126272619-126294999 protein_coding
ENSMUSG00000057945 (Gm17136)
predicted gene 17136 		ENSMUST00000169993 (Gm17136-001) 126176124-126176534 processed_pseudogene
ENSMUSG00000090559 (Gm17137)
predicted gene 17137 		ENSMUST00000164106 (Gm17137-002) 126164033-126168403 processed_transcript
ENSMUST00000165729 (Gm17137-001) 126165645-126166601 transcribed_processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TT_0001ENSG00000169180ENST00000304658ENST00000563138ENST00000568065ENSG00000188322ENST00000341901ENSG00000200138ENST00000363268ENSG00000200652ENST00000363782ENSG00000246465ENST00000501520ENSG00000250982ENST00000513369ENSG00000260452ENST00000565969CIL_0005TT_0002ENSMUSG00000000131ENSMUST00000009344ENSMUST00000163959ENSMUST00000166538ENSMUST00000168189ENSMUST00000168564ENSMUST00000170675ENSMUST00000171861ENSMUSG00000042978ENSMUST00000056028ENSMUSG00000057945ENSMUST00000169993ENSMUSG00000090559ENSMUST00000164106ENSMUST00000165729
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000169180 ENST00000304658 9.325±0.00 7.225±0.00 0.974±0.00 8.806±3.00 5.638±0.74 5.734±0.63 1.993±0.94 5.655±2.80 2.278±0.74 5.573±1.22 2.469±0.00 7.905±3.15 9.438±0.41 23.876±12.67
ENST00000561488 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562408 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563138 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.374±0.00 14.619±0.00 61.203±0.00
ENST00000564337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564905 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568065 N/A N/A N/A N/A N/A N/A N/A N/A 7.053±0.00 14.420±0.00 N/A 15.503±0.00 12.851±1.27 N/A
ENST00000569216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570007 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188322 ENST00000341901 0.123±0.00 0.869±0.00 0.083±0.00 2.940±2.45 0.433±0.37 0.234±0.00 0.207±0.19 0.529±0.48 0.054±0.00 0.430±0.32 1.883±1.51 0.820±0.48 0.113±0.01 3.613±1.52
ENSG00000200138 ENST00000363268 N/A N/A N/A 0.539±0.00 N/A N/A N/A N/A 0.572±0.00 N/A N/A 1.462±0.00 N/A N/A
ENSG00000200652 ENST00000363782 N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.433±0.00 N/A 0.452±0.00 N/A 0.144±0.00
ENSG00000246465 ENST00000501520 0.168±0.00 0.329±0.00 N/A 0.319±0.00 0.106±0.08 0.124±0.00 0.279±0.05 0.231±0.00 0.081±0.00 0.034±0.01 0.208±0.17 0.082±0.08 0.018±0.00 0.199±0.06
ENSG00000250982 ENST00000513369 0.215±0.00 8.850±0.00 N/A 11.311±0.00 10.337±0.00 14.915±0.00 0.203±0.00 14.085±0.00 0.037±0.00 5.678±0.00 1.152±0.00 1.119±1.07 0.046±0.00 0.365±0.00
ENSG00000260452 ENST00000565969 0.109±0.00 0.147±0.00 N/A 0.042±0.00 1.347±0.00 N/A 0.876±0.00 0.179±0.00 N/A 1.569±0.00 N/A 0.294±0.16 0.113±0.00 0.038±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000131 ENSMUST00000009344 6.177±0.56 9.712±3.41 N/A N/A 6.206±0.87 N/A 3.401±0.79 4.993±1.33 3.332±0.88 4.625±0.93 2.105±0.59 5.621±1.82 5.863±0.63 33.692±4.09
ENSMUST00000163959 N/A N/A N/A 81.703±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 41.047±0.00 N/A
ENSMUST00000164741 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166538 N/A N/A N/A N/A 26.164±0.00 45.201±15.18 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167315 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168189 15.767±2.49 11.224±5.03 16.427±0.90 20.480±7.78 11.161±4.53 12.326±4.76 5.856±0.97 7.631±1.39 7.166±2.92 13.673±3.38 3.265±1.17 12.559±3.70 12.580±3.44 50.933±17.08
ENSMUST00000168564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 31.975±11.90 N/A
ENSMUST00000168649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168933 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170675 N/A N/A N/A 8.714±1.18 3.607±0.36 3.092±0.00 5.334±0.47 2.354±0.00 2.579±0.39 4.147±0.17 3.080±0.78 2.629±0.30 2.880±0.85 N/A
ENSMUST00000171861 N/A 32.548±8.41 N/A N/A N/A 18.671±3.73 N/A 12.951±0.85 N/A N/A N/A 39.958±7.33 N/A N/A
ENSMUSG00000042978 ENSMUST00000056028 11.942±0.24 77.010±12.01 1.530±0.18 118.240±72.08 27.604±14.22 7.611±0.68 2.485±0.17 13.815±1.22 5.315±3.67 6.087±0.27 4.134±2.72 29.597±5.19 1.011±0.30 3.805±0.85
ENSMUSG00000057945 ENSMUST00000169993 0.374±0.17 N/A 0.110±0.00 0.155±0.03 0.296±0.00 0.556±0.32 0.202±0.06 0.460±0.15 0.153±0.16 N/A N/A 0.431±0.22 0.197±0.01 0.145±0.00
ENSMUSG00000090559 ENSMUST00000164106 0.015±0.01 0.023±0.00 0.069±0.00 0.115±0.09 0.057±0.03 0.055±0.01 0.021±0.00 0.044±0.02 0.068±0.05 0.057±0.03 0.009±0.00 0.045±0.04 0.083±0.09 0.069±0.03
ENSMUST00000165729 0.028±0.00 N/A N/A N/A 0.058±0.00 N/A 0.042±0.00 N/A 0.087±0.05 0.064±0.02 0.048±0.00 0.098±0.05 0.118±0.00 0.064±0.00

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