C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: exportin 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000000131 Xpo6 10090 - 7:126101715-126200501 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000009344 Xpo6-001 126101716-126200408 protein_coding
  ENSMUST00000163959 Xpo6-007 126169268-126200413 protein_coding
  ENSMUST00000164741 Xpo6-016 126140643-126161012 protein_coding
  ENSMUST00000165608 Xpo6-014 126104757-126112893 nonsense_mediated_decay
  ENSMUST00000165660 Xpo6-009 126108521-126112825 protein_coding
  ENSMUST00000166368 Xpo6-015 126169268-126181637 processed_transcript
  ENSMUST00000166538 Xpo6-018 126112899-126140662 nonsense_mediated_decay
  ENSMUST00000166540 Xpo6-017 126128227-126153035 nonsense_mediated_decay
  ENSMUST00000166719 Xpo6-012 126101721-126104808 nonsense_mediated_decay
  ENSMUST00000167147 Xpo6-013 126161008-126199928 nonsense_mediated_decay
  ENSMUST00000167268 Xpo6-019 126118471-126200422 retained_intron
  ENSMUST00000167315 Xpo6-004 126101721-126110051 retained_intron
  ENSMUST00000168189 Xpo6-002 126101715-126200501 protein_coding
  ENSMUST00000168564 Xpo6-011 126102346-126107129 nonsense_mediated_decay
  ENSMUST00000168649 Xpo6-008 126149296-126161020 processed_transcript
  ENSMUST00000168933 Xpo6-010 126102069-126105021 retained_intron
  ENSMUST00000169059 Xpo6-006 126151688-126200342 processed_transcript
  ENSMUST00000170675 Xpo6-003 126101721-126160871 processed_transcript
  ENSMUST00000171861 Xpo6-005 126101734-126107166 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000009344ENSMUST00000163959ENSMUST00000166538ENSMUST00000168189ENSMUST00000168564ENSMUST00000170675ENSMUST00000171861
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000009344 6.177±0.56 9.712±3.41 N/A N/A 6.206±0.87 N/A 3.401±0.79 4.993±1.33 3.332±0.88 4.625±0.93 2.105±0.59 5.621±1.82 5.863±0.63 33.692±4.09
ENSMUST00000163959 N/A N/A N/A 81.703±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 41.047±0.00 N/A
ENSMUST00000166538 N/A N/A N/A N/A 26.164±0.00 45.201±15.18 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168189 15.767±2.49 11.224±5.03 16.427±0.90 20.480±7.78 11.161±4.53 12.326±4.76 5.856±0.97 7.631±1.39 7.166±2.92 13.673±3.38 3.265±1.17 12.559±3.70 12.580±3.44 50.933±17.08
ENSMUST00000168564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 31.975±11.90 N/A
ENSMUST00000170675 N/A N/A N/A 8.714±1.18 3.607±0.36 3.092±0.00 5.334±0.47 2.354±0.00 2.579±0.39 4.147±0.17 3.080±0.78 2.629±0.30 2.880±0.85 N/A
ENSMUST00000171861 N/A 32.548±8.41 N/A N/A N/A 18.671±3.73 N/A 12.951±0.85 N/A N/A N/A 39.958±7.33 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TQ CIL_0005TQ_0002 CGP 7:125878419-126200501
CIL_0005TT CIL_0005TT_0002 CGP 7:126101715-126294999

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006611 IEA protein export from nucleus
GO:0008536 IEA Ran GTPase binding
GO:0008565 IEA protein transporter activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000041217 xpo6 exportin 6 protein_coding Danio_rerio
ENSG00000169180 XPO6 exportin 6 protein_coding Homo_sapiens

Loading