C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GSG1-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169181 GSG1L 9606 - 16:27787535-28063509 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000380897 GSG1L-001 27790894-27888157 protein_coding
  ENST00000395724 GSG1L-003 27790891-28063501 protein_coding
  ENST00000447459 GSG1L-002 27787535-28063509 protein_coding
  ENST00000562611 GSG1L-005 27823876-28063188 nonsense_mediated_decay
  ENST00000569166 GSG1L-004 27791370-27884570 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000380897ENST00000395724ENST00000447459ENST00000562611ENST00000569166
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000380897 N/A N/A N/A N/A N/A N/A N/A 0.364±0.00 0.086±0.00 0.815±0.00 0.417±0.04
ENST00000395724 N/A N/A N/A N/A N/A N/A N/A 0.035±0.00 0.240±0.00 0.370±0.00 N/A
ENST00000447459 0.010±0.00 1.243±0.38 0.007±0.00 0.038±0.00 0.464±0.00 0.024±0.00 0.009±0.00 0.030±0.01 0.065±0.04 N/A 0.085±0.00
ENST00000562611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.279±0.04
ENST00000569166 N/A N/A N/A 0.773±0.00 N/A N/A N/A N/A N/A 0.525±0.11 0.429±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FH CIL_0008FH_0001 VISTA 16:27337075-27938252
CIL_0005TR CIL_0005TR_0001 CGP 16:27550133-28063509
CIL_0005TQ CIL_0005TQ_0001 CGP 16:27787535-28211920

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0032279 IEA asymmetric synapse
GO:2000311 IEA regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037390 gsg1l gsg1-like protein_coding Danio_rerio
ENSMUSG00000046182 Gsg1l GSG1-like protein_coding Mus_musculus

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