C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GSG1-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000447459 GSG1L-002 ENSG00000169181 9606 - 16:27787535-28063509 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000447459
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000447459 0.010±0.00 1.243±0.38 0.007±0.00 0.038±0.00 0.464±0.00 0.024±0.00 0.009±0.00 0.030±0.01 0.065±0.04 0.085±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FH CIL_0008FH_0001 VISTA 16:27337075-27938252
CIL_0005TR CIL_0005TR_0001 CGP 16:27550133-28063509
CIL_0005TQ CIL_0005TQ_0001 CGP 16:27787535-28211920

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0032279 IEA asymmetric synapse
GO:2000311 IEA regulation of alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective glutamate receptor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000073935 Gsg1l-201 protein_coding Mus_musculus 0 342

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