C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005TR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000047578-ENSG00000169181 CGP 9606 16:27550133-28063509
GeneTranscriptPositionBiotype
ENSG00000047578 (KIAA0556)
KIAA0556 		ENST00000261588 (KIAA0556-001) 27550152-27780369 protein_coding
ENST00000562207 (KIAA0556-006) 27701434-27703954 retained_intron
ENST00000564749 (KIAA0556-003) 27628588-27654698 retained_intron
ENST00000565672 (KIAA0556-005) 27573922-27677931 nonsense_mediated_decay
ENST00000566023 (KIAA0556-002) 27550133-27574295 retained_intron
ENST00000567894 (KIAA0556-004) 27632464-27727873 processed_transcript
ENST00000568258 (KIAA0556-009) 27573907-27677818 protein_coding
ENST00000568622 (KIAA0556-008) 27776866-27778729 retained_intron
ENST00000573850 (KIAA0556-010) 27698328-27755752 retained_intron
ENST00000618117 (KIAA0556-011) 27618470-27631254 protein_coding
ENSG00000169181 (GSG1L)
GSG1-like 		ENST00000380897 (GSG1L-001) 27790894-27888157 protein_coding
ENST00000395724 (GSG1L-003) 27790891-28063501 protein_coding
ENST00000447459 (GSG1L-002) 27787535-28063509 protein_coding
ENST00000562611 (GSG1L-005) 27823876-28063188 nonsense_mediated_decay
ENST00000569166 (GSG1L-004) 27791370-27884570 protein_coding
ENSG00000221528 (AC016597.1)
 ENST00000408601 (AC016597.1-201) 27661900-27662018 miRNA
ENSG00000261736 (AC002551.1)
 ENST00000569881 (AC002551.1-001) 27643199-27644663 sense_intronic
ENSG00000273553 (CTD-2049O4.2)
 ENST00000613256 (CTD-2049O4.2-001) 27687182-27687522 sense_intronic
CIL_0005TR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032743-ENSMUSG00000046182 CGP 10090 7:125707915-126082411
GeneTranscriptPositionBiotype
ENSMUSG00000032743 (D430042O09Rik)
RIKEN cDNA D430042O09 gene 		ENSMUST00000069660 (D430042O09Rik-001) 125707915-125874793 protein_coding
ENSMUST00000122337 (D430042O09Rik-002) 125786255-125861996 protein_coding
ENSMUST00000124223 (D430042O09Rik-003) 125829667-125874793 protein_coding
ENSMUST00000132204 (D430042O09Rik-007) 125860682-125872252 protein_coding
ENSMUST00000142464 (D430042O09Rik-004) 125707915-125761832 protein_coding
ENSMUST00000148701 (D430042O09Rik-005) 125707991-125761769 protein_coding
ENSMUST00000155059 (D430042O09Rik-006) 125865271-125868064 retained_intron
ENSMUSG00000046182 (Gsg1l)
GSG1-like 		ENSMUST00000073935 (Gsg1l-201) 125878419-126082411 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TR_0001ENSG00000047578ENST00000261588ENST00000562207ENST00000564749ENST00000565672ENST00000566023ENST00000567894ENST00000568258ENST00000568622ENST00000573850ENST00000618117ENSG00000169181ENST00000380897ENST00000395724ENST00000447459ENST00000562611ENST00000569166ENSG00000221528ENST00000408601ENSG00000261736ENST00000569881ENSG00000273553ENST00000613256CIL_0005TR_0002ENSMUSG00000032743ENSMUST00000069660ENSMUST00000122337ENSMUST00000124223ENSMUST00000132204ENSMUST00000142464ENSMUST00000148701ENSMUST00000155059ENSMUSG00000046182ENSMUST00000073935
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005TR_0001ENSG00000047578ENST00000261588ENST00000567894ENST00000568258ENST00000573850ENST00000618117ENSG00000169181ENST00000380897ENST00000395724ENST00000447459ENST00000562611ENST00000569166ENSG00000221528ENST00000408601ENSG00000261736ENST00000569881ENSG00000273553ENST00000613256CIL_0005TR_0002ENSMUSG00000032743ENSMUST00000069660ENSMUST00000122337ENSMUST00000124223ENSMUSG00000046182ENSMUST00000073935
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000047578 ENST00000261588 0.475±0.00 1.435±0.00 0.338±0.00 0.847±0.00 1.727±0.16 0.517±0.00 0.407±0.00 2.006±0.00 0.241±0.11 N/A 1.011±0.00 1.541±0.96 1.165±0.28 1.462±0.15
ENST00000562207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565672 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.171±0.00 N/A N/A N/A
ENST00000568258 N/A N/A N/A N/A N/A N/A 0.927±0.00 N/A N/A N/A 1.324±0.00 N/A N/A N/A
ENST00000568622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.106±0.00 N/A N/A N/A
ENST00000618117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.619±0.00 N/A N/A N/A
ENSG00000169181 ENST00000380897 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.364±0.00 N/A 0.086±0.00 0.815±0.00 0.417±0.04
ENST00000395724 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.035±0.00 N/A 0.240±0.00 0.370±0.00 N/A
ENST00000447459 N/A 0.010±0.00 N/A 1.243±0.38 0.007±0.00 0.038±0.00 0.464±0.00 0.024±0.00 0.009±0.00 0.030±0.01 N/A 0.065±0.04 N/A 0.085±0.00
ENST00000562611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.279±0.04
ENST00000569166 N/A N/A N/A N/A N/A 0.773±0.00 N/A N/A N/A N/A N/A N/A 0.525±0.11 0.429±0.00
ENSG00000221528 ENST00000408601 N/A N/A N/A N/A N/A N/A 0.190±0.00 0.135±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000261736 ENST00000569881 0.066±0.00 0.397±0.00 N/A 0.195±0.00 0.393±0.24 0.538±0.00 0.275±0.00 0.236±0.00 0.283±0.00 0.173±0.00 N/A 0.195±0.11 N/A 0.250±0.00
ENSG00000273553 ENST00000613256 N/A N/A N/A 0.102±0.00 N/A N/A N/A N/A N/A N/A N/A 0.232±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032743 ENSMUST00000069660 2.882±1.59 1.221±0.00 2.201±0.31 2.922±1.88 2.471±0.82 3.392±1.17 1.085±0.60 2.633±1.17 1.323±0.53 2.518±1.32 1.030±0.30 6.019±1.67 3.084±1.48 9.959±2.98
ENSMUST00000122337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.241±0.00 N/A N/A N/A
ENSMUST00000124223 1.776±0.82 3.582±1.95 2.146±0.00 2.064±0.63 2.704±0.60 3.206±0.47 1.421±0.34 2.456±0.66 1.444±0.87 2.995±0.73 0.413±0.14 4.683±1.68 1.200±0.02 8.135±0.50
ENSMUST00000132204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000046182 ENSMUST00000073935 0.339±0.07 76.215±10.47 0.131±0.09 12.026±6.00 0.088±0.04 0.298±0.07 5.033±0.86 0.201±0.08 0.096±0.05 2.221±0.38 0.022±0.01 8.668±2.44 0.290±0.36 0.260±0.09

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