C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TBC1 domain family, member 10B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169221 TBC1D10B 9606 - 16:30357102-30370264 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000409939 TBC1D10B-001 30357102-30370264 protein_coding
  ENST00000464644 TBC1D10B-006 30359750-30365881 retained_intron
  ENST00000475650 TBC1D10B-003 30357102-30359674 retained_intron
  ENST00000475872 TBC1D10B-005 30358776-30360176 retained_intron
  ENST00000478158 TBC1D10B-004 30357107-30368007 retained_intron
  ENST00000490703 TBC1D10B-007 30358094-30365212 protein_coding
  ENST00000566671 TBC1D10B-008 30359184-30360043 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000409939ENST00000475650ENST00000478158
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000409939 17.207±0.00 13.103±0.00 0.650±0.00 6.715±6.00 11.662±0.00 6.367±5.71 3.387±3.31 11.235±0.00 1.960±0.53 19.087±0.00 10.653±10.38 19.442±15.34 17.628±4.21 29.952±0.42
ENST00000475650 N/A 4.645±0.00 N/A N/A 0.507±0.00 0.714±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478158 N/A 2.254±0.00 N/A 0.208±0.00 N/A N/A N/A 0.127±0.00 N/A 0.513±0.00 N/A 0.977±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WP CIL_0004WP_0001 CGP 16:30350766-30370264
CIL_0003V7 CIL_0003V7_0002 CGP 16:30357102-30377991

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005097 IDA:IEA Rab GTPase activator activity
GO:0005737 IEA cytoplasm
GO:0005886 IDA plasma membrane
GO:0032313 IDA:IEA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0042147 IMP retrograde transport, endosome to Golgi

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078604 TBC1D10B TBC1 domain family, member 10B protein_coding Danio_rerio
ENSMUSG00000042492 Tbc1d10b TBC1 domain family, member 10b protein_coding Mus_musculus

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