C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBC1 domain family, member 10B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409939 TBC1D10B-001 ENSG00000169221 9606 - 16:30357102-30370264 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000409939
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000409939 17.207±0.00 13.103±0.00 0.650±0.00 6.715±6.00 11.662±0.00 6.367±5.71 3.387±3.31 11.235±0.00 1.960±0.53 19.087±0.00 10.653±10.38 19.442±15.34 17.628±4.21 29.952±0.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WP CIL_0004WP_0001 CGP 16:30350766-30370264
CIL_0003V7 CIL_0003V7_0002 CGP 16:30357102-30377991

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005097 IDA:IEA Rab GTPase activator activity
GO:0005737 IEA cytoplasm
GO:0005886 IDA plasma membrane
GO:0032313 IDA:IEA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity
GO:0042147 IMP retrograde transport, endosome to Golgi

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120705 Tbc1d10b-001 protein_coding Mus_musculus 0 2617
ENSMUST00000124240 Tbc1d10b-002 processed_transcript Mus_musculus 0 865
ENSMUST00000147520 Tbc1d10b-004 retained_intron Mus_musculus 0 662
ENSMUST00000153857 Tbc1d10b-007 retained_intron Mus_musculus 0 617
ENSMUST00000138219 Tbc1d10b-003 retained_intron Mus_musculus 0 486
ENSMUST00000137987 Tbc1d10b-006 retained_intron Mus_musculus 0 407
ENSMUST00000133666 Tbc1d10b-005 retained_intron Mus_musculus 0 315

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